RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 OR2AG1Q9H205 316 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 VNN3Q9NY84 501 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 M0QX08 132 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 OXSR1O95747 527 aaPredicted RBP20.52■□□□□ 0.88
PTPN18-202ENST00000347849 EPHX1P07099 455 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 CD22P20273 847 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 IGFBP5P24593 272 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 GNPDA1P46926 289 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 IL18R1Q13478 541 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 CLCA4Q14CN2 919 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 LINC00299Q6ZSB3 139 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 FBLIM1Q8WUP2 373 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 ZNF566Q969W8 418 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 TMEM159Q96B96 161 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 MYADMQ96S97 322 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 CCM2Q9BSQ5 444 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 KAT8Q9H7Z6 458 aaKnown RBP20.52■□□□□ 0.88
PTPN18-202ENST00000347849 TRPV4Q9HBA0 871 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 LRTM1Q9HBL6 345 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 PRSS16Q9NQE7 514 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 DLGAP4Q9Y2H0 992 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 TPRKBQ9Y3C4 175 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 KPNA5O15131 536 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 ATG13O75143 517 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 FADS2O95864 444 aaKnown RBP20.52■□□□□ 0.88
PTPN18-202ENST00000347849 GSTM1P09488 218 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 SP140Q13342 867 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 SMN1Q16637 294 aaKnown RBP20.52■□□□□ 0.88
PTPN18-202ENST00000347849 RFX4Q33E94 735 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 RAET1GQ6H3X3 334 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 NRSN1Q8IZ57 195 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 KIAA1958Q8N8K9 716 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 RPL3LQ92901 407 aaKnown RBP20.52■□□□□ 0.88
PTPN18-202ENST00000347849 NUS1Q96E22 293 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 ZNF300Q96RE9 604 aaPredicted RBP20.52■□□□□ 0.88
PTPN18-202ENST00000347849 RAD18Q9NS91 495 aa20.52■□□□□ 0.88
PTPN18-202ENST00000347849 SLC28A1O00337 649 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 SLC16A5O15375 505 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 LILRB5O75023 590 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 PSIP1O75475 530 aaKnown RBP20.51■□□□□ 0.87
PTPN18-202ENST00000347849 GSNP06396 782 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 RETP07949 1114 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 MYCLP1P12525 358 aaPredicted RBP20.51■□□□□ 0.87
PTPN18-202ENST00000347849 HNMTP50135 292 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 SLC35A2P78381 396 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 FCHO2Q0JRZ9 810 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 EIF4HQ15056 248 aaKnown RBP20.51■□□□□ 0.87
PTPN18-202ENST00000347849 ZNF658BQ4V348 819 aaPredicted RBP20.51■□□□□ 0.87
PTPN18-202ENST00000347849 CATSPEREQ5SY80 951 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 CES5AQ6NT32 575 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 NLRP8Q86W28 1048 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 CHPFQ8IZ52 775 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 PLA2G15Q8NCC3 412 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 ZNF540Q8NDQ6 660 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 PSMA8Q8TAA3 256 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 SELENOMQ8WWX9 145 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 PYURFQ96I23 114 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 BCL7BQ9BQE9 202 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 DUSP21Q9H596 190 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 THG1LQ9NWX6 298 aaKnown RBP20.51■□□□□ 0.87
PTPN18-202ENST00000347849 SCN3BQ9NY72 215 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 SCHIP1Q9P0W5 487 aaPredicted RBP20.51■□□□□ 0.87
PTPN18-202ENST00000347849 ZNF229Q9UJW7 825 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 TMED5Q9Y3A6 229 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 PRKAB1Q9Y478 270 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 PRUNE2Q8WUY3 3088 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 PSMD11O00231 422 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 NPC1O15118 1278 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 IL6P05231 212 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 P2RY2P41231 377 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 SOX9P48436 509 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 MASP1P48740 699 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 ST13P50502 369 aaKnown RBP20.51■□□□□ 0.87
PTPN18-202ENST00000347849 PDGFRLQ15198 375 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 ZC3H12BQ5HYM0 836 aaKnown RBP20.51■□□□□ 0.87
PTPN18-202ENST00000347849 PARM1Q6UWI2 310 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 NEK10Q6ZWH5 1172 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 OR52E4Q8NGH9 312 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 FGF14Q92915 247 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 FAM120BQ96EK7 910 aaKnown RBP20.51■□□□□ 0.87
PTPN18-202ENST00000347849 DNAJC11Q9NVH1 559 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 ANKMY1Q9P2S6 941 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 DOCK8Q8NF50 2099 aa20.51■□□□□ 0.87
PTPN18-202ENST00000347849 LZTS3O60299 673 aaPredicted RBP20.5■□□□□ 0.87
PTPN18-202ENST00000347849 SLC16A8O95907 504 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 MT-ND2P03891 347 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 TACR1P25103 407 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 CLK3P49761 638 aaKnown RBP20.5■□□□□ 0.87
PTPN18-202ENST00000347849 HYAL1Q12794 435 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 CNTN1Q12860 1018 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 GTF2H3Q13889 308 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 BCL2A1Q16548 175 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 CARTPTQ16568 116 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 SYT6Q5T7P8 510 aaPredicted RBP20.5■□□□□ 0.87
PTPN18-202ENST00000347849 CPZQ66K79 652 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 ADNP2Q6IQ32 1131 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 ZNF547Q8IVP9 402 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 TCAIMQ8N3R3 496 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 SETD9Q8NE22 299 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 SUSD6Q92537 303 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms