RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 MLLT6P55198 1093 aaPredicted RBP10.54□□□□□ -0.72
CLCN6-202ENST00000346436 KLHL12Q53G59 568 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 CEP78Q5JTW2 689 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.54□□□□□ -0.72
CLCN6-202ENST00000346436 IZUMO1Q8IYV9 350 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 CLDN19Q8N6F1 224 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 ARL10Q8N8L6 244 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 TESCQ96BS2 214 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 TBC1D17Q9HA65 648 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 EHD3Q9NZN3 535 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 PNMA8CA0A1B0GUJ8 204 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 ASNA1O43681 348 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 FAM189A1O60320 539 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 OR1I1O60431 355 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 CNMDO75829 334 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 RSL1D1O76021 490 aaKnown RBP10.53□□□□□ -0.72
CLCN6-202ENST00000346436 ANGPTL1O95841 491 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 GP1BBP13224 206 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 AHCYP23526 432 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 ABATP80404 500 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 C1orf61Q13536 156 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 ARMCX4Q5H9R4 360 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 OR52E8Q6IFG1 317 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 ANKRD54Q6NXT1 300 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 FBXO42Q6P3S6 717 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 CXXC5Q7LFL8 322 aaKnown RBP10.53□□□□□ -0.72
CLCN6-202ENST00000346436 C19orf18Q8NEA5 215 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 SNX33Q8WV41 574 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 GATA6Q92908 595 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TMBIM1Q969X1 311 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 GPR62Q9BZJ7 368 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 PRTFDC1Q9NRG1 225 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 A0A1W2PPW3 197 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 CXCR6O00574 342 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 PRODHO43272 600 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 RPL10P27635 214 aaKnown RBP10.53□□□□□ -0.72
CLCN6-202ENST00000346436 PIGFQ07326 219 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 FCHO2Q0JRZ9 810 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TOP3AQ13472 1001 aaPredicted RBP10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TOR1AIP1Q5JTV8 583 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 MZT2AQ6P582 158 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TMEM174Q8WUU8 243 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 SLC13A3Q8WWT9 602 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 C12orf43Q96C57 262 aaKnown RBP10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TMCO6Q96DC7 493 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 HSPA12BQ96MM6 686 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 LPAR4Q99677 370 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TDRD1Q9BXT4 1180 aaKnown RBP10.53□□□□□ -0.72
CLCN6-202ENST00000346436 NUAK2Q9H093 628 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 IL21RQ9HBE5 538 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 MYH9P35579 1960 aaKnown RBP10.53□□□□□ -0.72
CLCN6-202ENST00000346436 A0A0U1RQS6 177 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TRIM24O15164 1050 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TSC22D2O75157 780 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 DIRAS1O95057 198 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 MED26O95402 600 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 POU2F1P14859 743 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 BTN3A2P78410 334 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TECRLQ5HYJ1 363 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 ZNF100Q8IYN0 542 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TEX19Q8NA77 164 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 OR6N1Q8NGY5 312 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TMIGD2Q96BF3 282 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 RNF31Q96EP0 1072 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 ASPNQ9BXN1 380 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 SLC17A9Q9BYT1 436 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TFB2MQ9H5Q4 396 aaKnown RBP10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TMPRSS11EQ9UL52 423 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 ZFR2Q9UPR6 939 aaKnown RBP10.53□□□□□ -0.72
CLCN6-202ENST00000346436 GOLGA4Q13439 2230 aaKnown RBP10.53□□□□□ -0.72
CLCN6-202ENST00000346436 TRIM64A6NGJ6 449 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 SOCS2O14508 198 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 AHSA1O95433 338 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 ELK4P28324 431 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 STT3AP46977 705 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 MED22Q15528 200 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 SPANXN2Q5MJ10 180 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 ERMP1Q7Z2K6 904 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 ZBED3Q96IU2 234 aaPredicted RBP10.53□□□□□ -0.72
CLCN6-202ENST00000346436 CHMP1AQ9HD42 196 aaPredicted RBP10.53□□□□□ -0.72
CLCN6-202ENST00000346436 PDE10AQ9Y233 779 aa10.53□□□□□ -0.72
CLCN6-202ENST00000346436 MAFKO60675 156 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 SOX30O94993 753 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 G6PDP11413 515 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 ENTPD1P49961 510 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 AFF1P51825 1210 aaKnown RBP10.52□□□□□ -0.72
CLCN6-202ENST00000346436 SP140Q13342 867 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 PIGGQ5H8A4 983 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 OGFRL1Q5TC84 451 aaPredicted RBP10.52□□□□□ -0.72
CLCN6-202ENST00000346436 ARL5BQ96KC2 179 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 ACTL7AQ9Y615 435 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 ZNF487B1APH4 448 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 PSMD11O00231 422 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 LEFTY1O75610 366 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 SEMA3DO95025 777 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 PTX3P26022 381 aaPredicted RBP10.52□□□□□ -0.72
CLCN6-202ENST00000346436 OMPP47874 163 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 ERVK-8P63133 956 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 DPY19L1Q2PZI1 675 aa10.52□□□□□ -0.72
CLCN6-202ENST00000346436 LYSMD3Q7Z3D4 306 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms