RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 MAPK1P28482 360 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 GKP32189 559 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 OLR1P78380 273 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 SPIBQ01892 262 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 DDX39BQ13838 428 aaKnown RBP17.14■□□□□ 0.33
VHL-202ENST00000345392 SSX1Q16384 188 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 EXOC3L2Q2M3D2 409 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 C5orf22Q49AR2 442 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 Q5BKY6 102 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 FAM209AQ5JX71 171 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 RTP2Q5QGT7 225 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 MFSD4BQ5TF39 518 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 ANGPTL8Q6UXH0 198 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 TAS1R1Q7RTX1 841 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 GTPBP3Q969Y2 492 aaKnown RBP17.14■□□□□ 0.33
VHL-202ENST00000345392 COPS8Q99627 209 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 DOHHQ9BU89 302 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 BARHL1Q9BZE3 327 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 SMURF1Q9HCE7 757 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 SLC22A14Q9Y267 594 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.14■□□□□ 0.33
VHL-202ENST00000345392 J3KTA2 159 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 CLDN11O75508 207 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 HLA-EP13747 358 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 ACRV1P26436 265 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 SLC11A2P49281 568 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 ARPC4P59998 168 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 MADCAM1Q13477 382 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 E2F2Q14209 437 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 CHRNA6Q15825 494 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 PTCHD3Q3KNS1 767 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 LAX1Q8IWV1 398 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 LGI4Q8N135 537 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 NAGSQ8N159 534 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 WDR36Q8NI36 951 aaKnown RBP17.14■□□□□ 0.33
VHL-202ENST00000345392 SOCS4Q8WXH5 440 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 TMCO6Q96DC7 493 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 ZFYVE1Q9HBF4 777 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 RANGRFQ9HD47 186 aaPredicted RBP17.14■□□□□ 0.33
VHL-202ENST00000345392 CREBZFQ9NS37 354 aa17.14■□□□□ 0.33
VHL-202ENST00000345392 EFCAB10A6NFE3 127 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 PCDH7O60245 1069 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 TIE1P35590 1138 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 DDOSTP39656 456 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 RHOAP61586 193 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 VEZF1Q14119 521 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 TRIM60Q495X7 471 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 GPR155Q7Z3F1 870 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 UBE2J2Q8N2K1 259 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 ST13P5Q8NFI4 369 aaPredicted RBP17.13■□□□□ 0.33
VHL-202ENST00000345392 MTERF1Q99551 399 aaKnown RBP17.13■□□□□ 0.33
VHL-202ENST00000345392 RDH14Q9HBH5 336 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 TRIM39Q9HCM9 518 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 PRM3Q9NNZ6 103 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 KLHL20Q9Y2M5 609 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 PCDHB11Q9Y5F2 797 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 TBKBP1A7MCY6 615 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 K7ERQ8 282 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 CCRL2O00421 344 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 PLK4O00444 970 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 ADAM12O43184 909 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 ELNP15502 786 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 ATF6P18850 670 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 ITGALP20701 1170 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 SOX3P41225 446 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 VEGFBP49765 207 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 FLT3LGP49771 235 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 FAM9CQ8IZT9 166 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 CACTIN-AS1Q8N1I8 211 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 ASB15Q8WXK1 588 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 CRELD1Q96HD1 420 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 ASPNQ9BXN1 380 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 ATG10Q9H0Y0 220 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 LHX3Q9UBR4 397 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 NUFIP1Q9UHK0 495 aaKnown RBP17.13■□□□□ 0.33
VHL-202ENST00000345392 PADI2Q9Y2J8 665 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 MAU2Q9Y6X3 613 aa17.13■□□□□ 0.33
VHL-202ENST00000345392 FZD6O60353 706 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 ALX3O95076 343 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 HNF4AP41235 474 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 GALK2Q01415 458 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 SRSF11Q05519 484 aaKnown RBP17.12■□□□□ 0.33
VHL-202ENST00000345392 FRG2Q64ET8 278 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 UBE2R2Q712K3 238 aaPredicted RBP17.12■□□□□ 0.33
VHL-202ENST00000345392 ZNF367Q7RTV3 350 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 DENND6BQ8NEG7 585 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 FLCNQ8NFG4 579 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 FRG2BQ96QU4 278 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 DYRK4Q9NR20 520 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 SNTG1Q9NSN8 517 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 ABCB8Q9NUT2 735 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 CRNNQ9UBG3 495 aaPredicted RBP17.12■□□□□ 0.33
VHL-202ENST00000345392 GRIP1Q9Y3R0 1128 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 GPSM3Q9Y4H4 160 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 V9GYH0 126 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 CA12O43570 354 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 CKMT1AP12532 417 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 ATP5C1P36542 298 aaKnown RBP17.12■□□□□ 0.33
VHL-202ENST00000345392 HSPA14Q0VDF9 509 aa17.12■□□□□ 0.33
VHL-202ENST00000345392 GAB1Q13480 694 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms