RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ELFN1P0C7U0 828 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CHATP28329 748 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ELK3P41970 407 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 IGSF11Q5DX21 431 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SYT6Q5T7P8 510 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CARFQ8N187 725 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 NKAPQ8N5F7 415 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OR2L3Q8NG85 312 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 FAM46AQ96IP4 442 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TBCBQ99426 244 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ZSWIM1Q9BR11 485 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PRDM9Q9NQV7 894 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 MAN1C1Q9NR34 630 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 YTHDF2Q9Y5A9 579 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 A6NL46 340 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PKIAP61925 76 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CDK5Q00535 292 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SELENBP1Q13228 472 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 DEFB115Q30KQ5 88 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 KRTCAP3Q53RY4 240 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 REEP3Q6NUK4 255 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SYT13Q7L8C5 426 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 NETO2Q8NC67 525 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 COQ10AQ96MF6 247 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 EGFL8Q99944 293 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 KIAA1324LA8MWY0 1029 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 RNGTTO60942 597 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TMEM11P17152 192 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PRPS1P60891 318 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PTSQ03393 145 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 FAM69AQ5T7M9 428 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ZC3HC1Q86WB0 502 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OR6C4Q8NGE1 309 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 STT3BQ8TCJ2 826 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CA5BP1Q8WTZ4 195 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 RNF25Q96BH1 459 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 LRR1Q96L50 414 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ABCB8Q9NUT2 735 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SLC2A6Q9UGQ3 507 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF223Q9UK11 482 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 AK6Q9Y3D8 172 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 METP08581 1390 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 C1orf167Q5SNV9 1468 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 RPS10-NUDT3A0A1W2PQS6 291 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 USP17L4A6NCW7 530 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SLCO2B1O94956 709 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 THBS1P07996 1170 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 USP17L8P0C7I0 530 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 T-ENOLP0DO92 83 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ITGA4P13612 1032 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 MMP8P22894 467 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 GCSHP23434 173 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 HPCAL1P37235 193 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 NKPD1Q17RQ9 610 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TFAP2EQ6VUC0 442 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 STRADAQ7RTN6 431 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SLC41A1Q8IVJ1 513 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 VWA5B2Q8N398 1253 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 DBF4BQ8NFT6 615 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PATZ1Q9HBE1 687 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CNTNAP4Q9C0A0 1308 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 KAT7O95251 611 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TCEA1P23193 301 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PGS1Q32NB8 556 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 C22orf42Q6IC83 251 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CES5AQ6NT32 575 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CD300LFQ8TDQ1 290 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OCEL1Q9H607 264 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TUBA4BQ9H853 241 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ARL15Q9NXU5 204 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 GDE1Q9NZC3 331 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 IQSEC2Q5JU85 1478 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 C5orf52A6NGY3 159 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 HCRTR2O43614 444 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 BIDP55957 195 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ABHD13Q7L211 337 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TSPYL5Q86VY4 417 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 MRPL57Q9BQC6 102 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TEX10Q9NXF1 929 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 M0R129 80 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 AIFM1O95831 613 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PRKXP51817 358 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PPIGQ13427 754 aaKnown RBP eCLIP3.66□□□□□ -1.822e-7■■■□□ 16.3
SYNE2-202ENST00000344113 PIGGQ5H8A4 983 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 PSMG4Q5JS54 123 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 APTXQ7Z2E3 356 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 S100A7AQ86SG5 101 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OR13J1Q8NGT2 312 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 OR6B3Q8NGW1 331 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF354BQ96LW1 612 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 ATP13A3Q9H7F0 1226 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 FIS1Q9Y3D6 152 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TBX22Q9Y458 520 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 CADP27708 2225 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 EIF1BO60739 113 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 LYPLA1O75608 230 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 DEDDO75618 318 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 GABARAPO95166 117 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 TDP2O95551 362 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 HNRNPLP14866 589 aaKnown RBP eCLIP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms