RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 DEPPQ9NTK1 212 aa15.3■□□□□ 0.04
NECTIN1-202ENST00000340882 ZNHIT6Q9NWK9 470 aaKnown RBP15.3■□□□□ 0.04
NECTIN1-202ENST00000340882 CRIM1Q9NZV1 1036 aa15.3■□□□□ 0.04
NECTIN1-202ENST00000340882 TCAF1Q9Y4C2 921 aa15.3■□□□□ 0.04
NECTIN1-202ENST00000340882 KLRC4-KLRK1H3BQV0 150 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 SMAPO00193 183 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 KPNA5O15131 536 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 PSMD3O43242 534 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 PSIP1O75475 530 aaKnown RBP15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 MBD3O95983 291 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 INHBBP09529 407 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 GLI4P10075 376 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 RPS3P23396 243 aaKnown RBP eCLIP15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 PPARGP37231 505 aaPredicted RBP15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 KCNJ11Q14654 390 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 P3H1Q32P28 736 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 ACSBG2Q5FVE4 666 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 CLEC9AQ6UXN8 241 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 LINC00523Q86TU6 105 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 ALG3Q92685 438 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 ANAPC5Q9UJX4 755 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 NAALAD2Q9Y3Q0 740 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 LIPGQ9Y5X9 500 aa15.29■□□□□ 0.04
NECTIN1-202ENST00000340882 NCKAP5O14513 1909 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 CDK2AP1O14519 115 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 SLC16A5O15375 505 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 CCNDBP1O95273 360 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 B3GALT4O96024 378 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 ACVR2AP27037 513 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 ADSLP30566 484 aaPredicted RBP15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 HOXC12P31275 282 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 FMO4P31512 558 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 ZFP36L2P47974 494 aaKnown RBP15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 TTPAP49638 278 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 ARHGAP19Q14CB8 494 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 KLHL38Q2WGJ6 581 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 AARS2Q5JTZ9 985 aaKnown RBP15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 PAMR1Q6UXH9 720 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 NFAM1Q8NET5 270 aaPredicted RBP15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 MCOLN3Q8TDD5 553 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 TM4SF19Q96DZ7 209 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 SLC6A16Q9GZN6 736 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 ETNK1Q9HBU6 452 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 DMRT3Q9NQL9 472 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 CHRAC1Q9NRG0 131 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 UTP6Q9NYH9 597 aaKnown RBP15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 SH2B3Q9UQQ2 575 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 GTF3C3Q9Y5Q9 886 aa15.28■□□□□ 0.04
NECTIN1-202ENST00000340882 ZANQ9Y493 2812 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 LCMT2O60294 686 aaKnown RBP15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 TJP3O95049 919 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 ATE1O95260 518 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 COILP38432 576 aaPredicted RBP15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 MAGEA1P43355 309 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 KIR2DL3P43628 341 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 TPM4P67936 248 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 OLR1P78380 273 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 ABATP80404 500 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 MPP1Q00013 466 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 DEFB113Q30KQ7 82 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 CAVIN1Q6NZI2 390 aaKnown RBP15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 ZNF585AQ6P3V2 769 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 PPP1R21Q6ZMI0 780 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 CAMKMTQ7Z624 323 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 CYP4X1Q8N118 509 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 ARMC10Q8N2F6 343 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 ACRBPQ8NEB7 543 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 MYRIPQ8NFW9 859 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 GOT1L1Q8NHS2 421 aaPredicted RBP15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 SLCO2A1Q92959 643 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 MRFAP1L1Q96HT8 127 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 GBP4Q96PP9 640 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 ANKHQ9HCJ1 492 aa15.27■□□□□ 0.04
NECTIN1-202ENST00000340882 TLN2Q9Y4G6 2542 aa15.27■□□□□ 0.03
NECTIN1-202ENST00000340882 KCNE1BA0A087WTH5 132 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 A0A0G2JMM0 328 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 A0A1W2PPB8 328 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 A0A1W2PRS3 328 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 A6NNC1 897 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 FAM166BA8MTA8 275 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 A8MUA0 341 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 KIR3DP1A8MWS1 328 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 MFAP3LO75121 409 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 NDUFS3O75489 264 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 LY6G6DO95868 133 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 HEXAP06865 529 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 ATP5DP30049 168 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 BTG2P78543 158 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 CRADDP78560 199 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 CHSY3Q70JA7 882 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 PRUNE1Q86TP1 453 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 SLC26A11Q86WA9 606 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 CYP4Z2PQ8N1L4 340 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 SLC35B2Q8TB61 432 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 SLC30A3Q99726 388 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 TMEM184CQ9NVA4 438 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 CBLCQ9ULV8 474 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 DUSP10Q9Y6W6 482 aa15.26■□□□□ 0.03
NECTIN1-202ENST00000340882 TCRBV7S2A1N4TA0A589 114 aa15.25■□□□□ 0.03
NECTIN1-202ENST00000340882 SAGE2PA6NJ88 616 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms