RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 TCF25Q9BQ70 676 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 SMG9Q9H0W8 520 aaKnown RBP9.76□□□□□ -0.85
HIF1A-202ENST00000337138 UCKL1Q9NWZ5 548 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 TMEM161AQ9NX61 479 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 RABL2BQ9UNT1 228 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 TRBV5-4A0A0C4DH59 114 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 SUV39H1O43463 412 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 HPRP00739 348 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 POLR2EP19388 210 aaKnown RBP9.76□□□□□ -0.85
HIF1A-202ENST00000337138 LIPAP38571 399 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 SLC15A1P46059 708 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 SLC11A1P49279 550 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 CLCN4P51793 760 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 PRSS36Q5K4E3 855 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 SERPINA13PQ6UXR4 307 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 TRIM46Q7Z4K8 759 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 PGBD3Q8N328 593 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 WFDC5Q8TCV5 224 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 NELL1Q92832 810 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 DNASE1L2Q92874 299 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 SCAMP4Q969E2 229 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 FUBP3Q96I24 572 aaKnown RBP eCLIP9.76□□□□□ -0.856e-6■□□□□ 8.1
HIF1A-202ENST00000337138 SLC22A12Q96S37 553 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 PHOX2BQ99453 314 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 FEVQ99581 238 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 C19orf43Q9BQ61 176 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 ACAT2Q9BWD1 397 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 TTLL2Q9BWV7 592 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 GABARAPL1Q9H0R8 117 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 MTIF3Q9H2K0 278 aaKnown RBP9.76□□□□□ -0.85
HIF1A-202ENST00000337138 ZNF556Q9HAH1 456 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 CTPS2Q9NRF8 586 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 FBXO9Q9UK97 447 aaPredicted RBP9.76□□□□□ -0.85
HIF1A-202ENST00000337138 RAB23Q9ULC3 237 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 PPT2Q9UMR5 302 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 SNX6Q9UNH7 406 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 TNFRSF11BO00300 401 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 PCDHGA12O60330 932 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 APOL3O95236 402 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 LAMP1P11279 417 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 SYN1P17600 705 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 SDC1P18827 310 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 CD40LGP29965 261 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 KDELR2P33947 212 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 CTSKP43235 329 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 CYP4F8P98187 520 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 CAMK2GQ13555 558 aaPredicted RBP9.76□□□□□ -0.85
HIF1A-202ENST00000337138 NAE1Q13564 534 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 STARD3Q14849 445 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 DGKKQ5KSL6 1271 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 CXorf57Q6NSI4 855 aaKnown RBP9.76□□□□□ -0.85
HIF1A-202ENST00000337138 TMCO2Q7Z6W1 182 aaPredicted RBP9.76□□□□□ -0.85
HIF1A-202ENST00000337138 LSRQ86X29 649 aaPredicted RBP9.76□□□□□ -0.85
HIF1A-202ENST00000337138 C19orf18Q8NEA5 215 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 C7orf57Q8NEG2 295 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 OTULINQ96BN8 352 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 CWH43Q9H720 699 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 HMX1Q9NP08 348 aaPredicted RBP9.76□□□□□ -0.85
HIF1A-202ENST00000337138 ACOT13Q9NPJ3 140 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 MALT1Q9UDY8 824 aa9.76□□□□□ -0.85
HIF1A-202ENST00000337138 MEN1O00255 615 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 BTN3A3O00478 584 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 SLC16A6O15403 523 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 NUAK1O60285 661 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 STC2O76061 302 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 C1SP09871 688 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 CHRNB1P11230 501 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 PRKAR2AP13861 404 aaKnown RBP9.75□□□□□ -0.85
HIF1A-202ENST00000337138 BPIP17213 487 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 ATF6P18850 670 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 PRKACBP22694 351 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 FEN1P39748 380 aaKnown RBP9.75□□□□□ -0.85
HIF1A-202ENST00000337138 CRISP3P54108 245 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 MEF2AQ02078 507 aaPredicted RBP9.75□□□□□ -0.85
HIF1A-202ENST00000337138 SELENBP1Q13228 472 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 LRIF1Q5T3J3 769 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 ZNF517Q6ZMY9 492 aaPredicted RBP9.75□□□□□ -0.85
HIF1A-202ENST00000337138 C11orf96Q7Z7L8 435 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 TMEM203Q969S6 136 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 EFHD2Q96C19 240 aaPredicted RBP9.75□□□□□ -0.85
HIF1A-202ENST00000337138 YIPF6Q96EC8 236 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 TIGARQ9NQ88 270 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 MARCH5Q9NX47 278 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 FZD4Q9ULV1 537 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 RNF6Q9Y252 685 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 EIF3FO00303 357 aaPredicted RBP9.75□□□□□ -0.85
HIF1A-202ENST00000337138 NOS1APO75052 506 aaPredicted RBP9.75□□□□□ -0.85
HIF1A-202ENST00000337138 ERN1O75460 977 aaKnown RBP9.75□□□□□ -0.85
HIF1A-202ENST00000337138 SNX4O95219 450 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 SOX14O95416 240 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 CRYZL1O95825 349 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 CKMT1AP12532 417 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 HOXA9P31269 272 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 DNAJA1P31689 397 aaKnown RBP9.75□□□□□ -0.85
HIF1A-202ENST00000337138 HTR2BP41595 481 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 NPRL3Q12980 569 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 HIST2H2ACQ16777 129 aaPredicted RBP9.75□□□□□ -0.85
HIF1A-202ENST00000337138 INO80DQ53TQ3 878 aaPredicted RBP9.75□□□□□ -0.85
HIF1A-202ENST00000337138 ADGRF1Q5T601 910 aa9.75□□□□□ -0.85
HIF1A-202ENST00000337138 KIAA1614Q5VZ46 1190 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms