RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 SNRPB2P08579 225 aaKnown RBP22.24■■□□□ 1.15
TSEN54-201ENST00000333213 HRH2P25021 359 aa22.24■■□□□ 1.15
TSEN54-201ENST00000333213 TMEM154Q6P9G4 183 aa22.24■■□□□ 1.15
TSEN54-201ENST00000333213 SLC23A3Q6PIS1 610 aa22.24■■□□□ 1.15
TSEN54-201ENST00000333213 BLOC1S3Q6QNY0 202 aa22.24■■□□□ 1.15
TSEN54-201ENST00000333213 ARL10Q8N8L6 244 aa22.24■■□□□ 1.15
TSEN54-201ENST00000333213 RCN3Q96D15 328 aa22.24■■□□□ 1.15
TSEN54-201ENST00000333213 SMOC1Q9H4F8 434 aa22.24■■□□□ 1.15
TSEN54-201ENST00000333213 PRM3Q9NNZ6 103 aa22.24■■□□□ 1.15
TSEN54-201ENST00000333213 MAGEA13PA6NCF6 341 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 TRIM38O00635 465 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 CTSVO60911 334 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 KLHL18O94889 574 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 PTX3P26022 381 aaPredicted RBP22.23■■□□□ 1.15
TSEN54-201ENST00000333213 SLC25A3Q00325 362 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 ACSM2AQ08AH3 577 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 HYAL2Q12891 473 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 RCAN2Q14206 197 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 SLC5A12Q1EHB4 618 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 ACSM2BQ68CK6 577 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 KRTCAP2Q8N6L1 136 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 CEP76Q8TAP6 659 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 METTL2AQ96IZ6 378 aaKnown RBP22.23■■□□□ 1.15
TSEN54-201ENST00000333213 TSSK3Q96PN8 268 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 F2RL3Q96RI0 385 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 NPAS2Q99743 824 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 ABCG4Q9H172 646 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 LRIT1Q9P2V4 623 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 ADGRE2Q9UHX3 823 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 POMT2Q9UKY4 750 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 PCDHGA4Q9Y5G9 962 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 KLK4Q9Y5K2 254 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 GOLGA4Q13439 2230 aaKnown RBP22.23■■□□□ 1.15
TSEN54-201ENST00000333213 NR5A2O00482 541 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 AIM2O14862 343 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 AHCYL1O43865 530 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 FESP07332 822 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 ANPEPP15144 967 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 ACPPP15309 386 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 JAK1P23458 1154 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 GRK3P35626 688 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 CYP4F3Q08477 520 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 CUL3Q13618 768 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 ZIC1Q15915 447 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 VPS26BQ4G0F5 336 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 DEPDC1Q5TB30 811 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 CACHD1Q5VU97 1274 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 FIGLAQ6QHK4 219 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 WDR48Q8TAF3 677 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 SERPINI1Q99574 410 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 RTKNQ9BST9 563 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 SORBS1Q9BX66 1292 aaKnown RBP22.23■■□□□ 1.15
TSEN54-201ENST00000333213 ZNF717Q9BY31 904 aaPredicted RBP22.23■■□□□ 1.15
TSEN54-201ENST00000333213 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.23■■□□□ 1.15
TSEN54-201ENST00000333213 RUVBL1Q9Y265 456 aaKnown RBP22.23■■□□□ 1.15
TSEN54-201ENST00000333213 R4GN57 208 aa22.23■■□□□ 1.15
TSEN54-201ENST00000333213 MDC1Q14676 2089 aaKnown RBP22.23■■□□□ 1.15
TSEN54-201ENST00000333213 CASC3O15234 703 aaKnown RBP22.22■■□□□ 1.15
TSEN54-201ENST00000333213 CALRP27797 417 aaKnown RBP22.22■■□□□ 1.15
TSEN54-201ENST00000333213 CAPZBP47756 277 aa22.22■■□□□ 1.15
TSEN54-201ENST00000333213 BIRC2Q13490 618 aa22.22■■□□□ 1.15
TSEN54-201ENST00000333213 SPIN4Q56A73 249 aa22.22■■□□□ 1.15
TSEN54-201ENST00000333213 KHDRBS2Q5VWX1 349 aaKnown RBP22.22■■□□□ 1.15
TSEN54-201ENST00000333213 GALNT18Q6P9A2 607 aa22.22■■□□□ 1.15
TSEN54-201ENST00000333213 COMMD6Q7Z4G1 85 aa22.22■■□□□ 1.15
TSEN54-201ENST00000333213 RETREG3Q86VR2 466 aa22.22■■□□□ 1.15
TSEN54-201ENST00000333213 METTL4Q8N3J2 472 aa22.22■■□□□ 1.15
TSEN54-201ENST00000333213 GATA6Q92908 595 aa22.22■■□□□ 1.15
TSEN54-201ENST00000333213 SLC7A8Q9UHI5 535 aa22.22■■□□□ 1.15
TSEN54-201ENST00000333213 PILRAQ9UKJ1 303 aa22.22■■□□□ 1.15
TSEN54-201ENST00000333213 SLC6A14Q9UN76 642 aa22.22■■□□□ 1.15
TSEN54-201ENST00000333213 AP1M2Q9Y6Q5 423 aa22.22■■□□□ 1.15
TSEN54-201ENST00000333213 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.22■■□□□ 1.15
TSEN54-201ENST00000333213 ASPDHA6ND91 283 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 PLPP1O14494 284 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 ZW10O43264 779 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 GALR2O43603 387 aaPredicted RBP22.21■■□□□ 1.15
TSEN54-201ENST00000333213 CLEC3AO75596 197 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 GBAP04062 536 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 PROS1P07225 676 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 ITGAXP20702 1163 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 PHEXP78562 749 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 MXRA7P84157 204 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 VN1R4Q7Z5H5 301 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 MFSD9Q8NBP5 474 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 VPS33AQ96AX1 596 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 TMEM74Q96NL1 305 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 TRAPPC9Q96Q05 1148 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 SLC25A23Q9BV35 468 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 LHX9Q9NQ69 397 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 SIRT5Q9NXA8 310 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 NLGN3Q9NZ94 848 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 A0A0J9YY10 115 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 LRIT2A6NDA9 550 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 RTCAO00442 366 aaKnown RBP22.21■■□□□ 1.15
TSEN54-201ENST00000333213 NUDT21O43809 227 aaKnown RBP22.21■■□□□ 1.15
TSEN54-201ENST00000333213 PRPS2P11908 318 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 SERPINB1P30740 379 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 AHRP35869 848 aa22.21■■□□□ 1.15
TSEN54-201ENST00000333213 POLR2JP52435 117 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms