RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 EFCAB9A8MZ26 197 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 M0QX08 132 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 ZNF197O14709 1029 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 SLC16A5O15375 505 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 WBP4O75554 376 aaKnown RBP13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 GSTM1P09488 218 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 BMP4P12644 408 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 POLR2EP19388 210 aaKnown RBP13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 IMPA1P29218 277 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 ITGA1P56199 1179 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 TMC8Q8IU68 726 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 TRAPPC5Q8IUR0 188 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 ENTHD1Q8IYW4 607 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 ST13P5Q8NFI4 369 aaPredicted RBP13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 ALPK1Q96QP1 1244 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 PAK6Q9NQU5 681 aaPredicted RBP13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 PCDHGB3Q9Y5G1 929 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 ZSCAN9O15535 394 aaPredicted RBP13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 ATG13O75143 517 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 RFPL2O75678 378 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 POU1F1P28069 291 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 HNF4AP41235 474 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 HBA1P69905 142 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 RAE1P78406 368 aaKnown RBP13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 KCNJ10P78508 379 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 TMEM115Q12893 351 aaPredicted RBP13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 GRIN2CQ14957 1233 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 ZNF385BQ569K4 471 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 NFKBIDQ8NI38 313 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 ATL1Q8WXF7 558 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 ZNF566Q969W8 418 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 GTPBP3Q969Y2 492 aaKnown RBP13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 DACH2Q96NX9 599 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 WDR12Q9GZL7 423 aaKnown RBP13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 C6orf62Q9GZU0 229 aaPredicted RBP13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 SPATA6Q9NWH7 488 aaPredicted RBP13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 MAFFQ9ULX9 164 aa13.52□□□□□ -0.25
ATP2C1-201ENST00000328560 KRBA1A5PL33 1030 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 H3BM21 787 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 PRMT3O60678 531 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 ELFN1P0C7U0 828 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 IDSP22304 550 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 CHI3L1P36222 383 aaPredicted RBP13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 RXRGP48443 463 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 CRYBA2P53672 197 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 GANABQ14697 944 aaKnown RBP13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 TEAD2Q15562 447 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 NIPAL1Q6NVV3 410 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 MSANTD1Q6ZTZ1 278 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 SYNPOQ8N3V7 929 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 MCFD2Q8NI22 146 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 C7orf34Q96L11 122 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 SLC35A5Q9BS91 424 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 DOHHQ9BU89 302 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 GABARAPL1Q9H0R8 117 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 ABCB10Q9NRK6 738 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 RAD18Q9NS91 495 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 RHCGQ9UBD6 479 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 RNF6Q9Y252 685 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 PPIL1Q9Y3C6 166 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 SNX8Q9Y5X2 465 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 J3KTA2 159 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 SH3BP5O60239 455 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 EFCAB14O75071 495 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 SLCO2B1O94956 709 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 CTSAP10619 480 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 TIMP2P16035 220 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 PORP16435 677 aaPredicted RBP13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 HOXB6P17509 224 aaKnown RBP13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 JUNDP17535 347 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 CD97P48960 835 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 IFITM3Q01628 133 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 C2orf80Q0P641 193 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 SLBPQ14493 270 aaKnown RBP eCLIP13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 CARTPTQ16568 116 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 SYT6Q5T7P8 510 aaPredicted RBP13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 TMEM215Q68D42 235 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 GRHL2Q6ISB3 625 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 MED27Q6P2C8 311 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 TRMT11Q7Z4G4 463 aaKnown RBP13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 OR10G2Q8NGC3 310 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 YIPF6Q96EC8 236 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 ZBTB20Q9HC78 741 aaPredicted RBP13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 ZNF229Q9UJW7 825 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 RAB23Q9ULC3 237 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 PCDHGA6Q9Y5G7 932 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 PMF1-BGLAPU3KQ54 211 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 DNAJB5O75953 348 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 ASMTP46597 345 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 EIF2B2P49770 351 aaKnown RBP13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 PROX2Q3B8N5 592 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 PRSS36Q5K4E3 855 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 PLPP4Q5VZY2 271 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 BRAT1Q6PJG6 821 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 OR9Q2Q8NGE9 314 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 FBLIM1Q8WUP2 373 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 BTN2A2Q8WVV5 523 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 POP5Q969H6 163 aaKnown RBP13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 C19orf43Q9BQ61 176 aa13.51□□□□□ -0.25
ATP2C1-201ENST00000328560 NEURL2Q9BR09 285 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms