RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 RORCP51449 518 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 SRSF11Q05519 484 aaKnown RBP17.24■□□□□ 0.35
PRKCB-202ENST00000321728 MTAPQ13126 283 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 DOC2BQ14184 412 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 EXOC3L2Q2M3D2 409 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 LRRC66Q68CR7 880 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 ANGPTL8Q6UXH0 198 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 GTPBP3Q969Y2 492 aaKnown RBP17.24■□□□□ 0.35
PRKCB-202ENST00000321728 RIPOR3Q96MK2 946 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 KATNAL1Q9BW62 490 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 CDCA4Q9BXL8 241 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 TOR4AQ9NXH8 423 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 PCDHB8Q9UN66 801 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 NOD1Q9Y239 953 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 TDRD15B5MCY1 1934 aaKnown RBP17.24■□□□□ 0.35
PRKCB-202ENST00000321728 NT5C1B-RDH14C9J2C7 533 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 RHOCP08134 193 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 AMD1P17707 334 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 MYL9P24844 172 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 RPIAP49247 311 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 WNT3P56703 355 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 HYAL2Q12891 473 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 NFE2Q16621 373 aaPredicted RBP17.24■□□□□ 0.35
PRKCB-202ENST00000321728 SPRYD7Q5W111 196 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 C19orf48Q6RUI8 117 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 FAM131AQ6UXB0 335 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 TSEN54Q7Z6J9 526 aaKnown RBP17.24■□□□□ 0.35
PRKCB-202ENST00000321728 ELMOD2Q8IZ81 293 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 SH3KBP1Q96B97 665 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 SRRQ9GZT4 340 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 PRM3Q9NNZ6 103 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 ACOXLQ9NUZ1 547 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 PADI3Q9ULW8 664 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 CDC42P60953 191 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.23■□□□□ 0.359e-7■■□□□ 14.1
PRKCB-202ENST00000321728 HCAR2Q8TDS4 363 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 SKA2Q8WVK7 121 aaPredicted RBP17.23■□□□□ 0.35
PRKCB-202ENST00000321728 ADAM2Q99965 735 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 PCDHB11Q9Y5F2 797 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 PIKFYVEQ9Y2I7 2098 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 ZSCAN5BA6NJL1 495 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 SCN2BO60939 215 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 HMGCLP35914 325 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 CASP9P55211 416 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 MXD1Q05195 221 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 MADCAM1Q13477 382 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 MICAQ29983 383 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 GPRC6AQ5T6X5 926 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 SYCE2Q6PIF2 218 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 PTCHD4Q6ZW05 846 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 ZNF280BQ86YH2 543 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 CSGALNACT1Q8TDX6 532 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 HHIPQ96QV1 700 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 COPS8Q99627 209 aa17.23■□□□□ 0.35
PRKCB-202ENST00000321728 YY2O15391 372 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 CCNB2O95067 398 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 FHP07954 510 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 LAMP1P11279 417 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 CKMT1AP12532 417 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 RPS3P23396 243 aaKnown RBP eCLIP17.22■□□□□ 0.352e-6■■■■■ 35.1
PRKCB-202ENST00000321728 POU1F1P28069 291 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 PRIM2P49643 509 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 DGKEP52429 567 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 RING1Q06587 406 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 PTGES3Q15185 160 aaKnown RBP17.22■□□□□ 0.35
PRKCB-202ENST00000321728 DUSP7Q16829 419 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 CYP27C1Q4G0S4 372 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 PLAG1Q6DJT9 500 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 BBS7Q8IWZ6 715 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 FUBP3Q96I24 572 aaKnown RBP eCLIP17.22■□□□□ 0.35
PRKCB-202ENST00000321728 FRMD6Q96NE9 622 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 OPALINQ96PE5 141 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 HLA-EP13747 358 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 IL12RB1P42701 662 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 CDH4P55283 916 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 SELENOWP63302 87 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 PSPHP78330 225 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 TEKQ02763 1124 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 SF1Q15637 639 aaKnown RBP17.22■□□□□ 0.35
PRKCB-202ENST00000321728 WDR45BQ5MNZ6 344 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 METTL2BQ6P1Q9 378 aaKnown RBP17.22■□□□□ 0.35
PRKCB-202ENST00000321728 CPA6Q8N4T0 437 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 TAPBPLQ9BX59 468 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 C11orf54Q9H0W9 315 aaPredicted RBP17.22■□□□□ 0.35
PRKCB-202ENST00000321728 RDH14Q9HBH5 336 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 HHATLQ9HCP6 504 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 CLN6Q9NWW5 311 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 FAM120CQ9NX05 1096 aaKnown RBP17.22■□□□□ 0.35
PRKCB-202ENST00000321728 CMAHPQ9Y471 501 aa17.22■□□□□ 0.35
PRKCB-202ENST00000321728 PLXNA4Q9HCM2 1894 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 A0A0G2JMP0 313 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 ACSL4O60488 711 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 IFNA8P32881 189 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 NFATC2Q13469 925 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 ADGRG2Q8IZP9 1017 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 VWA5B2Q8N398 1253 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 UROC1Q96N76 676 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 GON7Q9BXV9 100 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 CRLS1Q9UJA2 301 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 TMEM229AB2RXF0 380 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms