RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 FPGSQ05932 587 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 ST3GAL4Q11206 333 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 CCDC58Q4VC31 144 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 METTL3Q86U44 580 aaKnown RBP8.56□□□□□ -1.04
SSBP2-201ENST00000320672 MR1Q95460 341 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 HIST1H2AAQ96QV6 131 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 PIP5K1AQ99755 562 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 FTSJ1Q9UET6 329 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 DLGAP4Q9Y2H0 992 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 MITFO75030 526 aaPredicted RBP8.56□□□□□ -1.04
SSBP2-201ENST00000320672 STT3AP46977 705 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 ARHGDIBP52566 201 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 CDKN2DP55273 166 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 YBEYP58557 167 aaPredicted RBP8.56□□□□□ -1.04
SSBP2-201ENST00000320672 ENPP2Q13822 863 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 TMEFF1Q8IYR6 380 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 POLMQ9NP87 494 aaPredicted RBP8.56□□□□□ -1.04
SSBP2-201ENST00000320672 DERAQ9Y315 318 aa8.56□□□□□ -1.04
SSBP2-201ENST00000320672 BBIP1A8MTZ0 92 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 RPLP0P05388 317 aaKnown RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 HOXB8P17481 243 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 SNRPD2P62316 118 aaKnown RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 ERV3-1Q14264 604 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 RANBP3LQ86VV4 465 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 TREML1Q86YW5 311 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 OR6N1Q8NGY5 312 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 SLC7A6OSQ96CW6 309 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 ZNF700Q9H0M5 742 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 MKKSQ9NPJ1 570 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 TDP1Q9NUW8 608 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 OXSMQ9NWU1 459 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 HCFC1R1Q9NWW0 138 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 ZDHHC3Q9NYG2 299 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 CNOT4O95628 575 aaKnown RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 PDYNP01213 254 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 GNAZP19086 355 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 GABRA3P34903 492 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 DPYSQ14117 519 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 ZNF789Q5FWF6 425 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 C9orf135Q5VTT2 229 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 ZCCHC12Q6PEW1 402 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 CRELD2Q6UXH1 353 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 RNF111Q6ZNA4 994 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 LINC00597Q9H2U6 94 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 KCND1Q9NSA2 647 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 MTMR11A4FU01 709 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 TRIM64A6NGJ6 449 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 TMEM150CB9EJG8 249 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 H3BQ06 376 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 MUSKO15146 869 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 SNAI1O95863 264 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 ACADLP28330 430 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 MPP2Q14168 576 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 IQCF1Q8N6M8 205 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 OR5K1Q8NHB7 308 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 COQ8AQ8NI60 647 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 RLN3Q8WXF3 142 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 PPP1R14BQ96C90 147 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 TIFAQ96CG3 184 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 BTBD1Q9H0C5 482 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 RMI1Q9H9A7 625 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 PRDM8Q9NQV8 689 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 MKLN1Q9UL63 735 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 TLR6Q9Y2C9 796 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 RPH3AQ9Y2J0 694 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 NFS1Q9Y697 457 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 IGLON5A6NGN9 336 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 HERVK_113P63132 956 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 PRR5P85299 388 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 SLC25A11Q02978 314 aaKnown RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 FAM69BQ5VUD6 431 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 HS3ST5Q8IZT8 346 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 PCYT2Q99447 389 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 CGREF1Q99674 301 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 ERVK-6Q9BXR3 956 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 R3HDMLQ9H3Y0 253 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 HRASLS2Q9NWW9 162 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 ERVW-1Q9UQF0 538 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 OR2AT4A6NND4 320 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 KERAO60938 352 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 RPL3P39023 403 aaKnown RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 CDK6Q00534 326 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 LMAN2Q12907 356 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 SYVN1Q86TM6 617 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 TMEM126BQ8IUX1 230 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 OR4K17Q8NGC6 315 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 OR52E4Q8NGH9 312 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 STRA6Q9BX79 667 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 REV1Q9UBZ9 1251 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 ESR1P03372 595 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 ADGRF1Q5T601 910 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 BICRALQ6AI39 1079 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 LRCH3Q96II8 777 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 C7orf34Q96L11 122 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 OR2S2Q9NQN1 319 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 SORCS3Q9UPU3 1222 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 RUVBL1Q9Y265 456 aaKnown RBP8.55□□□□□ -1.04
SSBP2-201ENST00000320672 TNFP01375 233 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 RAP2AP10114 183 aa8.55□□□□□ -1.04
SSBP2-201ENST00000320672 MAGEA11P43364 429 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms