RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 OR10H1Q9Y4A9 318 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 PRAMEF33A0A0G2JMD5 474 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 TMEM189-UBE2V1I3L0A0 370 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 PRAMEF10O60809 474 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 IFNA21P01568 189 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 FHP07954 510 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 NMBRP28336 390 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 RPL6Q02878 288 aaKnown RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 TUBB3Q13509 450 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 PAOXQ6QHF9 649 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 SERPINA9Q86WD7 417 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 MMAAQ8IVH4 418 aaKnown RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 OR4F6Q8NGB9 312 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 OR8H1Q8NGG4 311 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CDC40O60508 579 aaKnown RBP eCLIP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 ATP6AP2O75787 350 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 ENDOD1O94919 500 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 SMAD3P84022 425 aaKnown RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 RAB40BQ12829 278 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 NFATC3Q12968 1075 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 RHEBQ15382 184 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 UGCGQ16739 394 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 RAB12Q6IQ22 244 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 LINGO4Q6UY18 593 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 TPRG1Q6ZUI0 275 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 CARM1Q86X55 608 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 JOSD2Q8TAC2 188 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 ADAM33Q9BZ11 813 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 MVB12BQ9H7P6 319 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 MYO7BQ6PIF6 2116 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 A0A0G2JPF8 293 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 NOTOA8MTQ0 251 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 HNRNPCL3B7ZW38 293 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 SEPT4O43236 478 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 PCDH7O60245 1069 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 ECI2O75521 394 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 ZMPSTE24O75844 475 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 HNRNPCL4P0DMR1 293 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 SSBP1Q04837 148 aaKnown RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 NBPF12Q5TAG4 269 aaPredicted RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 WDR53Q7Z5U6 358 aaPredicted RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 SLC43A3Q8NBI5 491 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 OR10H5Q8NGA6 315 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 OR5P2Q8WZ92 322 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 OR4K3Q96R72 315 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 ASF1AQ9Y294 204 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 GTPBP1O00178 669 aaKnown RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 PIRO00625 290 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 TBL1XO60907 577 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 USP12O75317 370 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 CD63P08962 238 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 EDNRBP24530 442 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 FNDC3BQ53EP0 1204 aaKnown RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 MRPL45Q9BRJ2 306 aaKnown RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 PCDH12Q9NPG4 1184 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 RDH16O75452 317 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 IVDP26440 423 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 SLC6A6P31641 620 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 TMEM62Q0P6H9 643 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 NANOGP8Q6NSW7 305 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 NCEH1Q6PIU2 408 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 GATAD2AQ86YP4 633 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 NXPE1Q8N323 547 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 CERS5Q8N5B7 392 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 C12orf29Q8N999 325 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 DNAJC1Q96KC8 554 aaKnown RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 ZNF578Q96N58 590 aaPredicted RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 NANOGQ9H9S0 305 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 KCNN3Q9UGI6 736 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 CACFD1Q9UGQ2 172 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 DISC1C4P0D8 188 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 DPM1O60762 260 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 IL7RP16871 459 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 NPRL3Q12980 569 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 GPR50Q13585 617 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 RAB39AQ14964 217 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 RSU1Q15404 277 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 PTCHD3Q3KNS1 767 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 CRTC2Q53ET0 693 aaPredicted RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 ADGRG2Q8IZP9 1017 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 SFXN5Q8TD22 340 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 SLC35A5Q9BS91 424 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 PRODH2Q9UF12 536 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 LCTP09848 1927 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 APC2O95996 2303 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 RBMS1P29558 406 aaKnown RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 C6orf136Q5SQH8 315 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 VANGL1Q8TAA9 524 aaPredicted RBP8.54□□□□□ -1.04
COL6A5-202ENST00000312481 TFAP2BQ92481 460 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 BIRC7Q96CA5 298 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 HEPHQ9BQS7 1158 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 ACAT2Q9BWD1 397 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 ASPNQ9BXN1 380 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 SCML1Q9UN30 329 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 IGKV6D-21A0A0A0MT36 114 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 TCRBV7S2A1N4TA0A589 114 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 PRODHO43272 600 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 PCDH8O95206 1070 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 MMP2P08253 660 aa8.54□□□□□ -1.04
COL6A5-202ENST00000312481 KCNC1P48547 511 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms