RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 CAPN5O15484 640 aaPredicted RBP13.28□□□□□ -0.28
CLCN6-201ENST00000312413 SNAP29O95721 258 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 RABGGTBP53611 331 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 UAP1L1Q3KQV9 507 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 PIGGQ5H8A4 983 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 SPIN3Q5JUX0 258 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 TMCO2Q7Z6W1 182 aaPredicted RBP13.28□□□□□ -0.28
CLCN6-201ENST00000312413 LNX2Q8N448 690 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 SAMD12Q8N8I0 201 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 TSPEARQ8WU66 669 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 SCRN2Q96FV2 425 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 JSRP1Q96MG2 331 aaPredicted RBP13.28□□□□□ -0.28
CLCN6-201ENST00000312413 EPYCQ99645 322 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 TBL1XR1Q9BZK7 514 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 OR51I1Q9H343 314 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 CCSER2Q9H7U1 834 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 MAP2P11137 1827 aaKnown RBP13.28□□□□□ -0.28
CLCN6-201ENST00000312413 KLHL33A6NCF5 533 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 TMEM150CB9EJG8 249 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 CCL16O15467 120 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 CHRNA1P02708 482 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 HTR1AP08908 422 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 DNASE1P24855 282 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 LRRC32Q14392 662 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 MYLK3Q32MK0 819 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 GRHL2Q6ISB3 625 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 SHQ1Q6PI26 577 aaKnown RBP13.28□□□□□ -0.28
CLCN6-201ENST00000312413 MAF1Q9H063 256 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 HCN3Q9P1Z3 774 aa13.28□□□□□ -0.28
CLCN6-201ENST00000312413 EBLN1P0CF75 366 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 HTR2AP28223 471 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 TREML2Q5T2D2 321 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 AADACL4Q5VUY2 407 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 GATAD2BQ8WXI9 593 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 SLC22A18Q96BI1 424 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 TCEAL4Q96EI5 215 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 SLC2A6Q9UGQ3 507 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 FBXL3Q9UKT7 428 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 SLC35F4A4IF30 521 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 CBSLP0DN79 551 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 CBSP35520 551 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 CD97P48960 835 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 TUBB3Q13509 450 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 RBM23Q86U06 439 aaKnown RBP13.27□□□□□ -0.28
CLCN6-201ENST00000312413 TREML1Q86YW5 311 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 OR52E4Q8NGH9 312 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 RPLP0P6Q8NHW5 317 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 THEM6Q8WUY1 208 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 FCAMRQ8WWV6 532 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 OSTF1Q92882 214 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 RELTQ969Z4 430 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 KIAA1191Q96A73 305 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 ACDQ96AP0 544 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 C14orf119Q9NWQ9 140 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 FNIP2Q9P278 1114 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 SRRDQ9UH36 339 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 ZNF451Q9Y4E5 1061 aa13.27□□□□□ -0.28
CLCN6-201ENST00000312413 ADGRB2O60241 1585 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 MEN1O00255 615 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 ERI3O43414 337 aaKnown RBP13.27□□□□□ -0.29
CLCN6-201ENST00000312413 TYROBPO43914 113 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 RASAL1O95294 804 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 FCER2P06734 321 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 PET100P0DJ07 73 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 IGFBP4P22692 258 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 CTBP2P56545 445 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 LRRC66Q68CR7 880 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 PRSS58Q8IYP2 241 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 ZNF565Q8N9K5 539 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 CCDC106Q9BWC9 280 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 ELOVL2Q9NXB9 296 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 KCNIP3Q9Y2W7 256 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 IFT52Q9Y366 437 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 LCHNA4D1U4 455 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 SLC38A8A6NNN8 435 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 C12orf71A8MTZ7 269 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 JUNP05412 331 aaKnown RBP13.27□□□□□ -0.29
CLCN6-201ENST00000312413 DNAJB13P59910 316 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 CD47Q08722 323 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 CCBE1Q6UXH8 406 aaPredicted RBP13.27□□□□□ -0.29
CLCN6-201ENST00000312413 CLEC20AQ6ZU45 233 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 DEFB132Q7Z7B7 95 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 SYNPOQ8N3V7 929 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 FUBP3Q96I24 572 aaKnown RBP eCLIP13.27□□□□□ -0.291e-7■■■■□ 24.4
CLCN6-201ENST00000312413 FZD8Q9H461 694 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 SMURF1Q9HCE7 757 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 PIGVQ9NUD9 493 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 MSRAQ9UJ68 235 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 UTS2RQ9UKP6 389 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 CLCA3PQ9Y6N3 262 aa13.27□□□□□ -0.29
CLCN6-201ENST00000312413 C9IYK1 514 aa13.26□□□□□ -0.29
CLCN6-201ENST00000312413 HPRP00739 348 aa13.26□□□□□ -0.29
CLCN6-201ENST00000312413 GLP1RP43220 463 aa13.26□□□□□ -0.29
CLCN6-201ENST00000312413 GJA9P57773 515 aa13.26□□□□□ -0.29
CLCN6-201ENST00000312413 FXYD6P3P58550 94 aa13.26□□□□□ -0.29
CLCN6-201ENST00000312413 SEMG2Q02383 582 aa13.26□□□□□ -0.29
CLCN6-201ENST00000312413 SCAMP5Q8TAC9 235 aa13.26□□□□□ -0.29
CLCN6-201ENST00000312413 FBRSL1Q9HCM7 1045 aaKnown RBP13.26□□□□□ -0.29
CLCN6-201ENST00000312413 SERINC1Q9NRX5 453 aa13.26□□□□□ -0.29
CLCN6-201ENST00000312413 MKS1Q9NXB0 559 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms