RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 CDHR3Q6ZTQ4 885 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 ZNF227Q86WZ6 799 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 TIGARQ9NQ88 270 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 TMEM45AQ9NWC5 275 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 ZDHHC7Q9NXF8 308 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 SLC1A7O00341 560 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 DIRAS1O95057 198 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 SLC35E2BP0CK96 405 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 KCNA5P22460 613 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 RPS24P62847 133 aaKnown RBP12.76□□□□□ -0.37
SNED1-201ENST00000310397 CPA6Q8N4T0 437 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 LRRC15Q8TF66 581 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 AKAP1Q92667 903 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNED1-201ENST00000310397 DOHHQ9BU89 302 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 SEZ6LQ9BYH1 1024 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 NSUN3Q9H649 340 aaKnown RBP12.76□□□□□ -0.37
SNED1-201ENST00000310397 BCAS3Q9H6U6 928 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 ZDHHC4Q9NPG8 344 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 EBF1Q9UH73 591 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 TMEM5Q9Y2B1 443 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 N4BP2Q86UW6 1770 aaPredicted RBP12.76□□□□□ -0.37
SNED1-201ENST00000310397 CNTN5O94779 1100 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 KAT7O95251 611 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 SELPP16109 830 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 PYHIN1Q6K0P9 492 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 CDH7Q9ULB5 785 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 A0A075B6Q4 140 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 OR1I1O60431 355 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 PRKACGP22612 351 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 S100A2P29034 98 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 SEC23BQ15437 767 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 CCBE1Q6UXH8 406 aaPredicted RBP12.76□□□□□ -0.37
SNED1-201ENST00000310397 CHERPQ8IWX8 916 aaKnown RBP12.76□□□□□ -0.37
SNED1-201ENST00000310397 PHC2Q8IXK0 858 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 FUNDC2Q9BWH2 189 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 FOLH1BQ9HBA9 442 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 COPS7AQ9UBW8 275 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 A0A0G2JLL6 359 aaPredicted RBP12.76□□□□□ -0.37
SNED1-201ENST00000310397 A0A1W2PRQ8 180 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 J3KR12 359 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 OPN1SWP03999 348 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 ZNF81P51508 661 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 VLDLRP98155 873 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 HNRNPA0Q13151 305 aaKnown RBP12.76□□□□□ -0.37
SNED1-201ENST00000310397 PRRT2Q7Z6L0 340 aaPredicted RBP12.76□□□□□ -0.37
SNED1-201ENST00000310397 ZNF598Q86UK7 904 aaKnown RBP12.76□□□□□ -0.37
SNED1-201ENST00000310397 Q8N402 240 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 PCDHGB2Q9Y5G2 931 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 LAMB1P07942 1786 aa12.76□□□□□ -0.37
SNED1-201ENST00000310397 SOCS5O75159 536 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 OR2B3O76000 313 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 SLC3A1Q07837 685 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 CHRNA6Q15825 494 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 FAM76BQ5HYJ3 339 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 LIPJQ5W064 366 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 TLDC1Q6P9B6 456 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 PRSS48Q7RTY5 328 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 THOC6Q86W42 341 aaKnown RBP12.75□□□□□ -0.37
SNED1-201ENST00000310397 ZSWIM9Q86XI8 627 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 NEIL3Q8TAT5 605 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 HPF1Q9NWY4 346 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 LRRN3E7EW58 273 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 RBMXL2O75526 392 aaKnown RBP12.75□□□□□ -0.37
SNED1-201ENST00000310397 SCGNO76038 276 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 ZNF30P17039 623 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 SMPD1P17405 629 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 RPA4Q13156 261 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 HSD17B12Q53GQ0 312 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 TMEM53Q6P2H8 277 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 PNLDC1Q8NA58 520 aaKnown RBP12.75□□□□□ -0.37
SNED1-201ENST00000310397 LRRN3Q9H3W5 708 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 RPS3P23396 243 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNED1-201ENST00000310397 RPP38P78345 283 aaKnown RBP12.75□□□□□ -0.37
SNED1-201ENST00000310397 NPRL3Q12980 569 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 GDPD4Q6W3E5 623 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 TCEANCQ8N8B7 351 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 OR56A1Q8NGH5 318 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 COPZ2Q9P299 210 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 SH3D21A4FU49 640 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 DIO3P55073 304 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 BAIAP2L2Q6UXY1 529 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 OR13J1Q8NGT2 312 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 FCRL3Q96P31 734 aaPredicted RBP12.75□□□□□ -0.37
SNED1-201ENST00000310397 ENAMQ9NRM1 1142 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 DNAJC27Q9NZQ0 273 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 ARID1AO14497 2285 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 INMT-MINDY4F8WBC2 141 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 APODP05090 189 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 SLC35G1Q2M3R5 365 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 BORAQ6PGQ7 559 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 RANBP9Q96S59 729 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 TBX5Q99593 518 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 RNF208Q9H0X6 261 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 XYLT2Q9H1B5 865 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 BOLA2-SMG1P6H3BVE0 249 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 DHRS4L1P0CG22 281 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 MAP2K3P46734 347 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 OLIG2Q13516 323 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 NPAS4Q8IUM7 802 aa12.75□□□□□ -0.37
SNED1-201ENST00000310397 OR5AK3PQ8NH89 298 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms