RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 WACQ9BTA9 647 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 IKZF5Q9H5V7 419 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 GRIP1Q9Y3R0 1128 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 H3BM21 787 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 DLGAP1O14490 977 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 SLC16A6O15403 523 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 FHP07954 510 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 IL7P13232 177 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 HK3P52790 923 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 MLLT10P55197 1068 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 HSPB3Q12988 150 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 HEPACAMQ14CZ8 416 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 SPHARQ15513 63 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 SETMARQ53H47 684 aaPredicted RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 SUSD1Q6UWL2 747 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 ZNF467Q7Z7K2 595 aaPredicted RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 RAB42Q8N4Z0 105 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 BEND7Q8N7W2 519 aaPredicted RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 EXOSC8Q96B26 276 aaKnown RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 CEP295NLQ96MC4 621 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 ZNF717Q9BY31 904 aaPredicted RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 AKIP1Q9NQ31 210 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 SEC14L4Q9UDX3 406 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 SCN1AP35498 2009 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 A0A1W2PRB8 838 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 C6orf47O95873 294 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 RGS6P49758 472 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 ZNF140P52738 457 aaPredicted RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 YBX1P67809 324 aaKnown RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 SF1Q15637 639 aaKnown RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 CTF1Q16619 201 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 CAPN13Q6MZZ7 669 aaPredicted RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 MRPL39Q9NYK5 338 aaKnown RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 CCDC59Q9P031 241 aaKnown RBP13.01□□□□□ -0.33
SEC23A-201ENST00000307712 GJD2Q9UKL4 321 aa13.01□□□□□ -0.33
SEC23A-201ENST00000307712 GSAPA4D1B5 854 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 CLDN24A6NM45 220 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 HHLA1C9JL84 531 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 I3L521 148 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 C4BPBP20851 252 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 NOS3P29474 1203 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 PGFP49763 221 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 SLC35A2P78381 396 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 XKR7Q5GH72 579 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 TMEM179BQ7Z7N9 219 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 RIMKLAQ8IXN7 391 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 LINC01465Q8N7H1 131 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 PCSK9Q8NBP7 692 aaKnown RBP13□□□□□ -0.33
SEC23A-201ENST00000307712 FAM46DQ8NEK8 389 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 UPF1Q92900 1129 aaKnown RBP eCLIP13□□□□□ -0.33
SEC23A-201ENST00000307712 CTRCQ99895 268 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 CENPOQ9BU64 300 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 ZDHHC3Q9NYG2 299 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 ETFAP13804 333 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 SDC1P18827 310 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 TNFSF8P32971 234 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 CSTF1Q05048 431 aaKnown RBP13□□□□□ -0.33
SEC23A-201ENST00000307712 E2F2Q14209 437 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 ATP13A5Q4VNC0 1218 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 C22orf42Q6IC83 251 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 AMIGO1Q86WK6 493 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 SLC37A3Q8NCC5 494 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 TADA1Q96BN2 335 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 MCMBPQ9BTE3 642 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 HTATIP2Q9BUP3 242 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 UCK2Q9BZX2 261 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 OSGEPL1Q9H4B0 414 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 TMEM45AQ9NWC5 275 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 PCDHB11Q9Y5F2 797 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 C12orf71A8MTZ7 269 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 GJB5O95377 273 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 LRG1P02750 347 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 CYP2A6P11509 494 aaPredicted RBP13□□□□□ -0.33
SEC23A-201ENST00000307712 RPS3P23396 243 aaKnown RBP eCLIP13□□□□□ -0.337e-11■□□□□ 10.6
SEC23A-201ENST00000307712 MAPK12P53778 367 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 SLC14A2Q15849 920 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 CRB2Q5IJ48 1285 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 LRRC66Q68CR7 880 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 RNF130Q86XS8 419 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 TIGD4Q8IY51 512 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 NXPE1Q8N323 547 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 CADM2Q8N3J6 435 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 ACPTQ9BZG2 426 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 FAM83DQ9H4H8 585 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 RNF167Q9H6Y7 350 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 ACSL6Q9UKU0 697 aa13□□□□□ -0.33
SEC23A-201ENST00000307712 TSPAN4O14817 238 aa12.99□□□□□ -0.33
SEC23A-201ENST00000307712 OR2B3O76000 313 aa12.99□□□□□ -0.33
SEC23A-201ENST00000307712 CNR2P34972 360 aa12.99□□□□□ -0.33
SEC23A-201ENST00000307712 CTSL3PQ5NE16 218 aa12.99□□□□□ -0.33
SEC23A-201ENST00000307712 FUT10Q6P4F1 479 aa12.99□□□□□ -0.33
SEC23A-201ENST00000307712 CCDC28AQ8IWP9 274 aa12.99□□□□□ -0.33
SEC23A-201ENST00000307712 ADGRG2Q8IZP9 1017 aa12.99□□□□□ -0.33
SEC23A-201ENST00000307712 GHDCQ8N2G8 530 aa12.99□□□□□ -0.33
SEC23A-201ENST00000307712 DYNC2LI1Q8TCX1 351 aa12.99□□□□□ -0.33
SEC23A-201ENST00000307712 GGHQ92820 318 aa12.99□□□□□ -0.33
SEC23A-201ENST00000307712 KAT2AQ92830 837 aa12.99□□□□□ -0.33
SEC23A-201ENST00000307712 UFD1Q92890 307 aa12.99□□□□□ -0.33
SEC23A-201ENST00000307712 RHBDF1Q96CC6 855 aa12.99□□□□□ -0.33
SEC23A-201ENST00000307712 TMEM80Q96HE8 168 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms