RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 SCDO00767 359 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 NRP1O14786 923 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 B3GALT2O43825 422 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 CCNKO75909 580 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 SEC24DO94855 1032 aaPredicted RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 MYF6P23409 242 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 STK19P49842 368 aaPredicted RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 SLC6A19Q695T7 634 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 FRMD7Q6ZUT3 714 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 USP51Q70EK9 711 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 SLCO6A1Q86UG4 719 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 OR51D1Q8NGF3 324 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 OR5L2Q8NGL0 311 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 FDXACB1Q9BRP7 624 aaPredicted RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 TTYH2Q9BSA4 534 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 DUSP23Q9BVJ7 150 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 ANKMY1Q9P2S6 941 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 JAG2Q9Y219 1238 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 POLHQ9Y253 713 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 NAALAD2Q9Y3Q0 740 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 GXYLT2A0PJZ3 443 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 ZNF182P17025 639 aaPredicted RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 PSMB4P28070 264 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 PXYLP1Q8TE99 480 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 PRRT1Q99946 306 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 SEMA3CQ99985 751 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 CPEB1Q9BZB8 566 aaKnown RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 ALG9Q9H6U8 611 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 TAS2R10Q9NYW0 307 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 GDE1Q9NZC3 331 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 FBXO7Q9Y3I1 522 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 DUSP10Q9Y6W6 482 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 KRBOX1C9JBD0 128 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 NME6O75414 186 aaPredicted RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 ADAP00813 363 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 STEAP4Q687X5 459 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 ZNF517Q6ZMY9 492 aaPredicted RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 CIR1Q86X95 450 aaPredicted RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 PHC2Q8IXK0 858 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 UMODL1-AS1Q8N2C9 162 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 PTGR2Q8N8N7 351 aaPredicted RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 NECAB3Q96P71 396 aaPredicted RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 ZDHHC3Q9NYG2 299 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 WASF3Q9UPY6 502 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 TEX51A0A1B0GUA7 166 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 D6RAR5 112 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 CDC40O60508 579 aaKnown RBP eCLIP3.9□□□□□ -1.79
USH2A-201ENST00000307340 HOXA9P31269 272 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 CTBSQ01459 385 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 DPY19L2P1Q6NXN4 242 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 FAM198BQ6UWH4 519 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 FAM183BPQ6ZVS7 135 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 GPR142Q7Z601 462 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 EDEM1Q92611 657 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 PHF21BQ96EK2 531 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 SLC25A21Q9BQT8 299 aaPredicted RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 TRMT13Q9NUP7 481 aaKnown RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 PTGFRNQ9P2B2 879 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 FTCDNL1E5RQL4 147 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 GPR37L1O60883 481 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 IFNA1P01562 189 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 ETS2P15036 469 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 MZF1P28698 734 aaPredicted RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 RBMS1P29558 406 aaKnown RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 RPS14P62263 151 aaKnown RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 TIGD6Q17RP2 521 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 CHRDL2Q6WN34 429 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 CAND1Q86VP6 1230 aaKnown RBP3.9□□□□□ -1.79
USH2A-201ENST00000307340 CCDC71LQ8N9Z2 235 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 FCAMRQ8WWV6 532 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 SEC22CQ9BRL7 303 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 MLXQ9UH92 298 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 FOXN1O15353 648 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 KCNJ5P48544 419 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 PPA1Q15181 289 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 KIAA1161Q6NSJ0 714 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 SHFQ7M4L6 423 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 CAMKK1Q8N5S9 505 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 HDAC10Q969S8 669 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 PLEKHM1Q9Y4G2 1056 aa3.9□□□□□ -1.79
USH2A-201ENST00000307340 TBC1D3KA0A087X1G2 549 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 TBC1D3BA6NDS4 549 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 TBC1D3FA6NER0 549 aaPredicted RBP3.89□□□□□ -1.79
USH2A-201ENST00000307340 AGRPO00253 132 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 WRBO00258 174 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 SLC2A2P11168 524 aaPredicted RBP3.89□□□□□ -1.79
USH2A-201ENST00000307340 DUSP3P51452 185 aaPredicted RBP3.89□□□□□ -1.79
USH2A-201ENST00000307340 WNT3AP56704 352 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 PCK2Q16822 640 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 DUOXA1Q1HG43 343 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 TBC1D3GQ6DHY5 549 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 PYDC1Q8WXC3 89 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 TPD52L3Q96J77 140 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 SLC22A12Q96S37 553 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 NMUR2Q9GZQ4 415 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 PAQR5Q9NXK6 330 aaPredicted RBP3.89□□□□□ -1.79
USH2A-201ENST00000307340 NXT1Q9UKK6 140 aaKnown RBP3.89□□□□□ -1.79
USH2A-201ENST00000307340 INSL6Q9Y581 213 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 GPRIN2O60269 458 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 MC3RP41968 323 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms