RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ACADVLP49748 655 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 CLCNKAP51800 687 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 GPR139Q6DWJ6 353 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 ERI1Q8IV48 349 aaKnown RBP12.27□□□□□ -0.45
USP38-201ENST00000307017 SAMD12Q8N8I0 201 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 MFSD8Q8NHS3 518 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 NSMAFQ92636 917 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 ISOC1Q96CN7 298 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 ZNF641Q96N77 438 aaPredicted RBP12.27□□□□□ -0.45
USP38-201ENST00000307017 ZFR2Q9UPR6 939 aaKnown RBP12.27□□□□□ -0.45
USP38-201ENST00000307017 GPR52Q9Y2T5 361 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 ATRNL1Q5VV63 1379 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 KRBA1A5PL33 1030 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 MATN2O00339 956 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 LATO43561 262 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 IFNA7P01567 189 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 YES1P07947 543 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 L1CAMP32004 1257 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 MECP2P51608 486 aaKnown RBP12.27□□□□□ -0.45
USP38-201ENST00000307017 VARS2Q5ST30 1063 aaKnown RBP12.27□□□□□ -0.45
USP38-201ENST00000307017 MFSD2AQ8NA29 543 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 TLCD1Q96CP7 247 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 P2RY13Q9BPV8 354 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 STRA6Q9BX79 667 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 MRPS33Q9Y291 106 aaKnown RBP12.27□□□□□ -0.45
USP38-201ENST00000307017 CARD8Q9Y2G2 431 aa12.27□□□□□ -0.45
USP38-201ENST00000307017 SOCS2O14508 198 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 SLC15A1P46059 708 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 PDX1P52945 283 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 OGDHQ02218 1023 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 FPGSQ05932 587 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 NCBP2-AS2Q69YL0 99 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 HERVK_113Q902F9 699 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 SLC45A3Q96JT2 553 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 HHIPQ96QV1 700 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 TBL1XR1Q9BZK7 514 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 NRXN1Q9ULB1 1477 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 PPIBP23284 216 aaKnown RBP12.26□□□□□ -0.45
USP38-201ENST00000307017 RAB4BP61018 213 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 ILF2Q12905 390 aaKnown RBP12.26□□□□□ -0.45
USP38-201ENST00000307017 MFSD13AQ14CX5 517 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 LCLAT1Q6UWP7 414 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 ALPK1Q96QP1 1244 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 TSSK6Q9BXA6 273 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 SLC9A3R1O14745 358 aaPredicted RBP12.26□□□□□ -0.45
USP38-201ENST00000307017 LCKP06239 509 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 KELP23276 732 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 KCNQ1P51787 676 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 SSTP61278 116 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 GRPEL2Q8TAA5 225 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 THRSPQ92748 146 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 USB1Q9BQ65 265 aaKnown RBP12.26□□□□□ -0.45
USP38-201ENST00000307017 MTFR1LQ9H019 292 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 ELOVL2Q9NXB9 296 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 THUMPD1Q9NXG2 353 aaKnown RBP12.26□□□□□ -0.45
USP38-201ENST00000307017 LAMP5Q9UJQ1 280 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 M0R2N6 131 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 HSPA12AO43301 675 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 AHSGP02765 367 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 ZNF12P17014 697 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 SPAG16Q8N0X2 631 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 ABCD2Q9UBJ2 740 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 ADAMTS6Q9UKP5 1117 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 MEIS3P2A8K0S8 358 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 HAS3O00219 553 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 CLDN11O75508 207 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 ASGR1P07306 291 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 PTPN6P29350 595 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 CCND3P30281 292 aaPredicted RBP12.26□□□□□ -0.45
USP38-201ENST00000307017 DNAJA1P31689 397 aaKnown RBP12.26□□□□□ -0.45
USP38-201ENST00000307017 LASP1Q14847 261 aaKnown RBP12.26□□□□□ -0.45
USP38-201ENST00000307017 ZNF542PQ5EBM4 170 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 VGLL2Q8N8G2 317 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 ZNF565Q8N9K5 539 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 OR6N2Q8NGY6 317 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 FAM83CQ9BQN1 747 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 ORAI3Q9BRQ5 295 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 PPIL3Q9H2H8 161 aaKnown RBP12.26□□□□□ -0.45
USP38-201ENST00000307017 KCNN3Q9UGI6 736 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 GMEB2Q9UKD1 530 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 RNF6Q9Y252 685 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 PCDHGB3Q9Y5G1 929 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 RIC1Q4ADV7 1423 aa12.26□□□□□ -0.45
USP38-201ENST00000307017 EEF1E1-BLOC1S5C9J1V9 151 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 NPIPA5E9PKD4 350 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 ASLP04424 464 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 EPHA1P21709 976 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 SPANXN4Q5MJ08 99 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 STRADAQ7RTN6 431 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 TOR1AIP2Q8NFQ8 470 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 FANK1Q8TC84 345 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 SMARCD2Q92925 531 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 PYURFQ96I23 114 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 AP1S3Q96PC3 154 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 PAK6Q9NQU5 681 aaPredicted RBP12.25□□□□□ -0.45
USP38-201ENST00000307017 SARDHQ9UL12 918 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 NPIPA1Q9UND3 350 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 C14orf166Q9Y224 244 aaKnown RBP12.25□□□□□ -0.45
USP38-201ENST00000307017 HEMK1Q9Y5R4 338 aaPredicted RBP12.25□□□□□ -0.45
USP38-201ENST00000307017 PDCD5O14737 125 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms