RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 AQP9O43315 295 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 SUV39H1O43463 412 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 SLCO2B1O94956 709 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 PABPC1P11940 636 aaKnown RBP14.56□□□□□ -0.08
CSDC2-201ENST00000306149 FUT4P22083 530 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 TGFBR2P37173 567 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 EIF2B2P49770 351 aaKnown RBP14.56□□□□□ -0.08
CSDC2-201ENST00000306149 ITGA1P56199 1179 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 MC1RQ01726 317 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 ZNF385BQ569K4 471 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 CATSPEREQ5SY80 951 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 FAM180BQ6P0A1 224 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 CADM3Q8N126 398 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 PROX1Q92786 737 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 NEIL2Q969S2 332 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 TMEM159Q96B96 161 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 PKP4Q99569 1192 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 SLIRPQ9GZT3 109 aaKnown RBP14.56□□□□□ -0.08
CSDC2-201ENST00000306149 ACSL6Q9UKU0 697 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 COL4A6Q14031 1691 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 PCM1Q15154 2024 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 UNC80Q8N2C7 3258 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 SERTM1A2A2V5 107 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 OR2A25A4D2G3 310 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 CLDN24A6NM45 220 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 M0R129 80 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 MYO1DO94832 1006 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 C8AP07357 584 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 GSTM1P09488 218 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 ETFAP13804 333 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 CD36P16671 472 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 IDSP22304 550 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 IMPA1P29218 277 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 POLR2LP62875 67 aaKnown RBP14.56□□□□□ -0.08
CSDC2-201ENST00000306149 MEF2AQ02078 507 aaPredicted RBP14.56□□□□□ -0.08
CSDC2-201ENST00000306149 DNASE1L3Q13609 305 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 PROX2Q3B8N5 592 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 PRSS36Q5K4E3 855 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 TMPRSS11BQ86T26 416 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 DDX53Q86TM3 631 aaKnown RBP14.56□□□□□ -0.08
CSDC2-201ENST00000306149 FAM124AQ86V42 546 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 CPA6Q8N4T0 437 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 OR4A15Q8NGL6 344 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 C11orf24Q96F05 449 aaPredicted RBP14.56□□□□□ -0.08
CSDC2-201ENST00000306149 ABHD8Q96I13 439 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 FEVQ99581 238 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 EPS8L2Q9H6S3 715 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 OSGIN1Q9UJX0 560 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 ITGB1BP2Q9UKP3 347 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 EXO1Q9UQ84 846 aaKnown RBP14.56□□□□□ -0.08
CSDC2-201ENST00000306149 SH2B3Q9UQQ2 575 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 ITM2BQ9Y287 266 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 C1orf226A1L170 272 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 C9P02748 559 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 RECQLP46063 649 aaPredicted RBP14.56□□□□□ -0.08
CSDC2-201ENST00000306149 NUDT6P53370 316 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 FAHD1Q6P587 224 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 PAGE2Q7Z2X7 111 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 NPAS3Q8IXF0 933 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 LGALS12Q96DT0 336 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 CAPNS2Q96L46 248 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 EMILIN2Q9BXX0 1053 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 POLE4Q9NR33 117 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 GPATCH2Q9NW75 528 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 PCDHGA6Q9Y5G7 932 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 CCDC88CQ9P219 2028 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 TRIM43BA6NCK2 446 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 DPM1O60762 260 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 MAPK11Q15759 364 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 TRIM60Q495X7 471 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 UBE2UQ5VVX9 321 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 ADIPOR2Q86V24 386 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 OR5AK3PQ8NH89 298 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 CIDECQ96AQ7 238 aaPredicted RBP14.55□□□□□ -0.08
CSDC2-201ENST00000306149 CHST8Q9H2A9 424 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 RNF6Q9Y252 685 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 DENND4CQ5VZ89 1909 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 KPNA5O15131 536 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 PRMT3O60678 531 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 PSIP1O75475 530 aaKnown RBP14.55□□□□□ -0.08
CSDC2-201ENST00000306149 CTSLP07711 333 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 CTSAP10619 480 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 TYRP14679 529 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 POU2F1P14859 743 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 VIPR1P32241 457 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 HBA1P69905 142 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 VEZF1Q14119 521 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 ZDHHC20Q5W0Z9 365 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 GRHL2Q6ISB3 625 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 SLAIN1Q8ND83 568 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 ADPRHL2Q9NX46 363 aa14.55□□□□□ -0.08
CSDC2-201ENST00000306149 H0YIV9 168 aa14.54□□□□□ -0.08
CSDC2-201ENST00000306149 TGFB1P01137 390 aa14.54□□□□□ -0.08
CSDC2-201ENST00000306149 HLA-EP13747 358 aa14.54□□□□□ -0.08
CSDC2-201ENST00000306149 TIMP2P16035 220 aa14.54□□□□□ -0.08
CSDC2-201ENST00000306149 LIPAP38571 399 aa14.54□□□□□ -0.08
CSDC2-201ENST00000306149 IDH2P48735 452 aaKnown RBP14.54□□□□□ -0.08
CSDC2-201ENST00000306149 TMED10P49755 219 aaKnown RBP14.54□□□□□ -0.08
CSDC2-201ENST00000306149 DGKEP52429 567 aa14.54□□□□□ -0.08
CSDC2-201ENST00000306149 GRIN2CQ14957 1233 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms