RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 OR3A2P47893 321 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 JAM2P57087 298 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 PRKCDQ05655 676 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 PTPRRQ15256 657 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 SWI5Q1ZZU3 235 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 CWF19L1Q69YN2 538 aaKnown RBP7.55□□□□□ -1.2
SCN9A-201ENST00000303354 SYNPOQ8N3V7 929 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 SPERTQ8NA61 448 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 WDR92Q96MX6 357 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 RDH14Q9HBH5 336 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 DIABLOQ9NR28 239 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 CRNNQ9UBG3 495 aaPredicted RBP7.55□□□□□ -1.2
SCN9A-201ENST00000303354 ZFR2Q9UPR6 939 aaKnown RBP7.55□□□□□ -1.2
SCN9A-201ENST00000303354 PDLIM1O00151 329 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 SOCS2O14508 198 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 TTKP33981 857 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 RPS26P62854 115 aaKnown RBP7.55□□□□□ -1.2
SCN9A-201ENST00000303354 BNIP2Q12982 314 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 C3orf38Q5JPI3 329 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 CLLU1OSQ5K130 101 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 AGTRAPQ6RW13 159 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 TMIGD1Q6UXZ0 262 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 C12orf40Q86WS4 652 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 GALNT12Q8IXK2 581 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 GLIS1Q8NBF1 620 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 WDR20Q8TBZ3 569 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 CHID1Q9BWS9 393 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 ZNF576Q9H609 170 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 P2RX2Q9UBL9 471 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 ING4Q9UNL4 249 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 PCDHGB5Q9Y5G0 923 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 FAM155AB1AL88 458 aaPredicted RBP7.55□□□□□ -1.2
SCN9A-201ENST00000303354 CLIC1O00299 241 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 TSSK4Q6SA08 328 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 ARL9Q6T311 187 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 LINC00471Q8N535 108 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 OTUB2Q96DC9 234 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 HSPA12BQ96MM6 686 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 CMKLR1Q99788 373 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 LGR4Q9BXB1 951 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 ANKRD10Q9NXR5 420 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 CAMK2AQ9UQM7 478 aa7.55□□□□□ -1.2
SCN9A-201ENST00000303354 STAT5AP42229 794 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 CHRNEQ04844 493 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 PMS2P3Q13401 168 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 RBM48Q5RL73 367 aaKnown RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 PDSS1Q5T2R2 415 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 RBM15BQ8NDT2 890 aaKnown RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 CRELD1Q96HD1 420 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 C12orf42Q96LP6 360 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 CDH22Q9UJ99 828 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 NOCTQ9UK39 431 aaKnown RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 HSD3B2P26439 372 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 SNTA1Q13424 505 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 LYSMD4Q5XG99 296 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 NSMCE3Q96MG7 304 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 FAM129BQ96TA1 746 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 METTL8Q9H825 291 aaKnown RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 G3V3Y1 287 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 PRAMEF12O95522 483 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 PPIBP23284 216 aaKnown RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 XKP51811 444 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 NR0B2Q15466 257 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 UBE2UQ5VVX9 321 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 BRAT1Q6PJG6 821 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 ZSCAN4Q8NAM6 433 aaPredicted RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 SLC35F5Q8WV83 523 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 KCNN1Q92952 543 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 ZNF285Q96NJ3 590 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 NSUN5Q96P11 429 aaKnown RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 HOPXQ9BPY8 73 aaPredicted RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 ASPNQ9BXN1 380 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 VDAC3Q9Y277 283 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 RBM47A0AV96 593 aaKnown RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 E7ENX8 843 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 SGK494L7N484 410 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 GJA8P48165 433 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 LTC4SQ16873 150 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 ACMSDQ8TDX5 336 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 CCDC115Q96NT0 180 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 SMIM14Q96QK8 99 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 RTKNQ9BST9 563 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 RAB11FIP5Q9BXF6 653 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 SAR1AQ9NR31 198 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 ZNF282Q9UDV7 671 aaPredicted RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 UGT2B11O75310 529 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 VNN2O95498 520 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 PRH1P02810 166 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 ADARP55265 1226 aaKnown RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 SHC2P98077 582 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 PLCXD2Q0VAA5 305 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 GRIK2Q13002 908 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 PDCD4Q53EL6 469 aaKnown RBP7.54□□□□□ -1.2
SCN9A-201ENST00000303354 SNX29P2Q8IUI4 249 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 ALPK1Q96QP1 1244 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 C14orf105Q9NVL8 296 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 STOML2Q9UJZ1 356 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 FADS3Q9Y5Q0 445 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 USP32Q8NFA0 1604 aa7.54□□□□□ -1.2
SCN9A-201ENST00000303354 TSPAN4O14817 238 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms