RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 OR1E2P47887 323 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 RPP38P78345 283 aaKnown RBP12.42□□□□□ -0.42
HIF3A-204ENST00000300862 TMEM115Q12893 351 aaPredicted RBP12.42□□□□□ -0.42
HIF3A-204ENST00000300862 IL18R1Q13478 541 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 ZNF284Q2VY69 593 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 GRHL2Q6ISB3 625 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 MSANTD1Q6ZTZ1 278 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 GPR155Q7Z3F1 870 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 SLCO6A1Q86UG4 719 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 ANKRD13BQ86YJ7 626 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 SYNPOQ8N3V7 929 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 ST13P5Q8NFI4 369 aaPredicted RBP12.42□□□□□ -0.42
HIF3A-204ENST00000300862 OR52J3Q8NH60 311 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 SPPL2AQ8TCT8 520 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 HPS1Q92902 700 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 GLMNQ92990 594 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 KCNC2Q96PR1 638 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 GABARAPL1Q9H0R8 117 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 HMG20AQ9NP66 347 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 AMBNQ9NP70 447 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 SPHK2Q9NRA0 654 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 ACSL6Q9UKU0 697 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 EXO1Q9UQ84 846 aaKnown RBP12.42□□□□□ -0.42
HIF3A-204ENST00000300862 TESMINQ9Y4I5 508 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 NPC1O15118 1278 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 PCDHGA12O60330 932 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 GCM2O75603 506 aaPredicted RBP12.41□□□□□ -0.42
HIF3A-204ENST00000300862 VIPP01282 170 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 CATP04040 527 aaKnown RBP12.41□□□□□ -0.42
HIF3A-204ENST00000300862 ETFAP13804 333 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 ZNF30P17039 623 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 POLR2EP19388 210 aaKnown RBP12.41□□□□□ -0.42
HIF3A-204ENST00000300862 IDSP22304 550 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 RRM2P31350 389 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 KRT20P35900 424 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 KCNJ10P78508 379 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 DNASE1L3Q13609 305 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 MAD2L1BPQ15013 274 aaPredicted RBP12.41□□□□□ -0.42
HIF3A-204ENST00000300862 RGNQ15493 299 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 IQCCQ4KMZ1 466 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 AHSA2Q719I0 299 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 DSG4Q86SJ6 1040 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 RASGRP3Q8IV61 690 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 SYTL1Q8IYJ3 562 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 MFSD4AQ8N468 514 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 C2orf73Q8N5S3 287 aaPredicted RBP12.41□□□□□ -0.42
HIF3A-204ENST00000300862 TRAM1L1Q8N609 369 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 OR4A15Q8NGL6 344 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 STARD8Q92502 1023 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 RPL3LQ92901 407 aaKnown RBP12.41□□□□□ -0.42
HIF3A-204ENST00000300862 GLYATL1Q969I3 302 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 AP2M1Q96CW1 435 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 C7orf34Q96L11 122 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 DUSP21Q9H596 190 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 GPBP1L1Q9HC44 474 aaPredicted RBP12.41□□□□□ -0.42
HIF3A-204ENST00000300862 TDP1Q9NUW8 608 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 GULP1Q9UBP9 304 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 OGDHLQ9ULD0 1010 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 NDRG4Q9ULP0 352 aaKnown RBP12.41□□□□□ -0.42
HIF3A-204ENST00000300862 TPRKBQ9Y3C4 175 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 C1orf226A1L170 272 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 TMEM229AB2RXF0 380 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 H0YIV9 168 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 M0QX08 132 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 PRMT3O60678 531 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 ATG13O75143 517 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 TGFB1P01137 390 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 LCKP06239 509 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 CCL5P13501 91 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 GJA8P48165 433 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 NCS1P62166 190 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 OCA2Q04671 838 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 STARD3Q14849 445 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 INAVAQ3KP66 663 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 PUS10Q3MIT2 529 aaKnown RBP12.41□□□□□ -0.42
HIF3A-204ENST00000300862 AGAP7PQ5VUJ5 663 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 KIAA1614Q5VZ46 1190 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 TMEM236Q5W0B7 351 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 ERICH5Q6P6B1 374 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 CCDC149Q6ZUS6 474 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 NEK10Q6ZWH5 1172 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 NPAS3Q8IXF0 933 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 ZNF566Q969W8 418 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 CIDECQ96AQ7 238 aaPredicted RBP12.41□□□□□ -0.42
HIF3A-204ENST00000300862 MRGPRX3Q96LB0 322 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 ZSWIM3Q96MP5 696 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 APOL4Q9BPW4 351 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 WDR12Q9GZL7 423 aaKnown RBP12.41□□□□□ -0.42
HIF3A-204ENST00000300862 OR51B5Q9H339 312 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 GPATCH2Q9NW75 528 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 SCN3BQ9NY72 215 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 PNMA8BQ9ULN7 279 aaPredicted RBP12.41□□□□□ -0.42
HIF3A-204ENST00000300862 PCM1Q15154 2024 aa12.41□□□□□ -0.42
HIF3A-204ENST00000300862 ABHD14A-ACY1A0A1B0GW23 586 aa12.4□□□□□ -0.42
HIF3A-204ENST00000300862 SERTM1A2A2V5 107 aa12.4□□□□□ -0.42
HIF3A-204ENST00000300862 ZBBXA8MT70 800 aa12.4□□□□□ -0.42
HIF3A-204ENST00000300862 WASH3PC4AMC7 463 aa12.4□□□□□ -0.42
HIF3A-204ENST00000300862 K7ESM1 405 aa12.4□□□□□ -0.42
HIF3A-204ENST00000300862 PLK4O00444 970 aa12.4□□□□□ -0.42
HIF3A-204ENST00000300862 SUV39H1O43463 412 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms