RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 INTS5Q6P9B9 1019 aaKnown RBP10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 TIGARQ9NQ88 270 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 TVP23BQ9NYZ1 205 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 NCANO14594 1321 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 ENTPD1P49961 510 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 PTPRRQ15256 657 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 OR4K3Q96R72 315 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 COPS8Q99627 209 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 LAMP5Q9UJQ1 280 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 TMPRSS11EQ9UL52 423 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 SALL3Q9BXA9 1300 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 A0A0J9YVX5 310 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 MITFO75030 526 aaPredicted RBP10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 PGM5Q15124 567 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 SAMD7Q7Z3H4 446 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 LZTR1Q8N653 840 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 ALLCQ8N6M5 410 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 OR5K1Q8NHB7 308 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 CRB3Q9BUF7 120 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 SERTAD4Q9NUC0 356 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 TISP43B9A030 160 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 STT3AP46977 705 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 NFKB2Q00653 900 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 PSD4Q8NDX1 1056 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 CNOT9Q92600 299 aaKnown RBP10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 KATNBL1Q9H079 304 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 BCAS3Q9H6U6 928 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 PLCE1Q9P212 2302 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 SPTAN1Q13813 2472 aaKnown RBP10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 A0A0A0MRY4 1105 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 ZNF670-ZNF695F2Z2N8 137 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 J3QLW9 94 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 SC5DO75845 299 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 BPGMP07738 259 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 HTR1AP08908 422 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 ZNF19P17023 458 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 GNPDA1P46926 289 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 PARGQ86W56 976 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 SPATA13Q96N96 652 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 DEFB129Q9H1M3 183 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 ZNF701Q9NV72 531 aaPredicted RBP10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 DCAF16Q9NXF7 216 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 GLTPQ9NZD2 209 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 KNDC1Q76NI1 1749 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 C9JVG2 144 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 PPP4CP60510 307 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 PFKPQ01813 784 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 TAF9Q16594 264 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 KIAA1161Q6NSJ0 714 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 CNTNAP4Q9C0A0 1308 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 TDRD15B5MCY1 1934 aaKnown RBP10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 FOXD2O60548 495 aaPredicted RBP10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 ZNF143P52747 638 aaPredicted RBP10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 CPSF6Q16630 551 aaKnown RBP eCLIP10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 GLIS3Q8NEA6 775 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 RNF215Q9Y6U7 377 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 TGOLN2O43493 480 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 ENDOUP21128 410 aaKnown RBP10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 DGKQP52824 942 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 NDST1P52848 882 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 HDAC10Q969S8 669 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 RNF157Q96PX1 679 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 RNF225M0QZC1 329 aaPredicted RBP10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 ARHGEF15O94989 841 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 SCELO95171 688 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 CD34P28906 385 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 TMEM139Q8IV31 216 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 TMEM80Q96HE8 168 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 TMEM41AQ96HV5 264 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 YIPF4Q9BSR8 244 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 UNC93B1Q9H1C4 597 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 IL26Q9NPH9 171 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 HIF1ANQ9NWT6 349 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 GTF2IRD1Q9UHL9 959 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 TPPPO94811 219 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 MYCLP1P12525 358 aaPredicted RBP10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 FBXL19Q6PCT2 694 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 C7orf57Q8NEG2 295 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 ISOC1Q96CN7 298 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 PRDM16Q9HAZ2 1276 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 CALML5Q9NZT1 146 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 ZNF726A6NNF4 738 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 HMGN1P05114 100 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 TFEBP19484 476 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 COQ5Q5HYK3 327 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 SAMD12Q8N8I0 201 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 OR6Q1Q8NGQ2 317 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 XAGE5Q8WWM1 108 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 ZNF606Q8WXB4 792 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 ADAD1Q96M93 576 aaKnown RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 COLEC11Q9BWP8 271 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 ACP6Q9NPH0 428 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 FAM96BQ9Y3D0 163 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 USP17L7P0C7H9 530 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 RAB6AP20340 208 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 PIGWQ7Z7B1 504 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 CARM1Q86X55 608 aa10.85□□□□□ -0.67
HDGFL3-201ENST00000299633 MINDY3Q9H8M7 445 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms