RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 ZRANB3Q5FWF4 1079 aa13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 FAM131AQ6UXB0 335 aa13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 CIR1Q86X95 450 aaPredicted RBP13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 WDR36Q8NI36 951 aaKnown RBP13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 UTP15Q8TED0 518 aaKnown RBP13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 TRMT61AQ96FX7 289 aaKnown RBP13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 NIPSNAP1Q9BPW8 284 aa13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 PAAF1Q9BRP4 392 aa13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 SNTG1Q9NSN8 517 aa13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 IMPAD1Q9NX62 359 aa13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 B3GNT2Q9NY97 397 aa13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 SLC6A14Q9UN76 642 aa13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 LSM2Q9Y333 95 aaKnown RBP13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 PPP2R3BQ9Y5P8 575 aa13.03□□□□□ -0.32
RPUSD4-201ENST00000298317 ADAMDEC1O15204 470 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 ODC1P11926 461 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 ITGB7P26010 798 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 WEE1P30291 646 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 CSTF2P33240 577 aaKnown RBP eCLIP13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 CRYBB2P43320 205 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 KIR3DL1P43629 444 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 ALDH9A1P49189 494 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 RHAGQ02094 409 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 RUNX1T1Q06455 604 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 SMARCB1Q12824 385 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 COL19A1Q14993 1142 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 LARS2Q15031 903 aaKnown RBP13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 TATDN3Q17R31 274 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 PTCHD3Q3KNS1 767 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 PLAG1Q6DJT9 500 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 NLGN4YQ8NFZ3 816 aaPredicted RBP13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 ACAT2Q9BWD1 397 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 MCOLN1Q9GZU1 580 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 MIXL1Q9H2W2 232 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 TMEM39AQ9NV64 488 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 WWOXQ9NZC7 414 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 MAPRE3Q9UPY8 281 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 GJA3Q9Y6H8 435 aa13.02□□□□□ -0.32
RPUSD4-201ENST00000298317 DRGXA6NNA5 263 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 FPGTO14772 594 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 SUV39H1O43463 412 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 PRLP01236 227 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 THP07101 528 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 PIPP12273 146 aaPredicted RBP13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 TGM4P49221 684 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 YBEYP58557 167 aaPredicted RBP13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 SNRPD2P62316 118 aaKnown RBP13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 HKDC1Q2TB90 917 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 NADSYN1Q6IA69 706 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 ZNF557Q8N988 423 aaPredicted RBP13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 ENKURQ8TC29 256 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 ULK4Q96C45 1275 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 MSLNLQ96KJ4 702 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 PANX1Q96RD7 426 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 EGFL8Q99944 293 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 ABCB9Q9NP78 766 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 NDUFAF4Q9P032 175 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 EIF3KQ9UBQ5 218 aaKnown RBP13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 SEC14L4Q9UDX3 406 aa13.02□□□□□ -0.33
RPUSD4-201ENST00000298317 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 CASTOR2A6NHX0 329 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 A8MVJ9 347 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 MAGEB17A8MXT2 336 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 LRATO95237 230 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 PDYNP01213 254 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 CYP17A1P05093 508 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 IFI30P13284 250 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 SMPD1P17405 629 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 PRPH2P23942 346 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 PTX3P26022 381 aaPredicted RBP13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 ZNF792Q3KQV3 632 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 ZNF648Q5T619 568 aaPredicted RBP13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 METTL2BQ6P1Q9 378 aaKnown RBP13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 MAMSTRQ6ZN01 415 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 AMIGO1Q86WK6 493 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 STK40Q8N2I9 435 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 LPCAT1Q8NF37 534 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 KIAA1143Q96AT1 154 aaPredicted RBP13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 MTFMTQ96DP5 389 aaKnown RBP13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 GIMAP5Q96F15 307 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 NECTIN4Q96NY8 510 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 FAM126AQ9BYI3 521 aaPredicted RBP13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 TEKT2Q9UIF3 430 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 VPS4AQ9UN37 437 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 ALG5Q9Y673 324 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 AP1M2Q9Y6Q5 423 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 OTOFQ9HC10 1997 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 H7C0S8 307 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 GPR39O43194 453 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 SCN2BO60939 215 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 CCNB2O95067 398 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 LGI1O95970 557 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 PSKH1P11801 424 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 ICAM2P13598 275 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 CTPS1P17812 591 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 OR1E1P30953 314 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 GPC1P35052 558 aa13.01□□□□□ -0.33
RPUSD4-201ENST00000298317 SOX3P41225 446 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms