RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 SLC2A2P11168 524 aaPredicted RBP14.36□□□□□ -0.11
SPIDR-201ENST00000297423 ITGA2P17301 1181 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 TACR1P25103 407 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 SSTR2P30874 369 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 PPM1FP49593 454 aaPredicted RBP14.36□□□□□ -0.11
SPIDR-201ENST00000297423 PGFP49763 221 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 CHRNEQ04844 493 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 PRKCDQ05655 676 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 HSPA14Q0VDF9 509 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 MAD2L1Q13257 205 aaPredicted RBP14.36□□□□□ -0.11
SPIDR-201ENST00000297423 FGFBP1Q14512 234 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 CHMP1BQ7LBR1 199 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 CLECL1Q8IZS7 167 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 B3GNT7Q8NFL0 401 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 ART5Q96L15 291 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 MRPL9Q9BYD2 267 aaKnown RBP14.36□□□□□ -0.11
SPIDR-201ENST00000297423 CDCP1Q9H5V8 836 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 MGAMO43451 1857 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 ISM1B1AKI9 464 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 RPS17P08708 135 aaKnown RBP14.36□□□□□ -0.11
SPIDR-201ENST00000297423 IRF1P10914 325 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 CYP2A6P11509 494 aaPredicted RBP14.36□□□□□ -0.11
SPIDR-201ENST00000297423 KDELR2P33947 212 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 SEMA3BQ13214 749 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 IRF3Q14653 427 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 SETMARQ53H47 684 aaPredicted RBP14.36□□□□□ -0.11
SPIDR-201ENST00000297423 RHEBL1Q8TAI7 183 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 BRSK1Q8TDC3 778 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 IMP4Q96G21 291 aaKnown RBP14.36□□□□□ -0.11
SPIDR-201ENST00000297423 DPCDQ9BVM2 203 aaPredicted RBP14.36□□□□□ -0.11
SPIDR-201ENST00000297423 ZYG11BQ9C0D3 744 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 SAGE1Q9NXZ1 904 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 ANK1P16157 1881 aa14.36□□□□□ -0.11
SPIDR-201ENST00000297423 HOXA2O43364 376 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 RPS19P39019 145 aaKnown RBP14.35□□□□□ -0.11
SPIDR-201ENST00000297423 C1DQ13901 141 aaKnown RBP14.35□□□□□ -0.11
SPIDR-201ENST00000297423 LCN1P1Q5VSP4 162 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 SUSD1Q6UWL2 747 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 C16orf59Q7L2K0 433 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 BCDIN3DQ7Z5W3 292 aaKnown RBP14.35□□□□□ -0.11
SPIDR-201ENST00000297423 ATP6V1C2Q8NEY4 427 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 RIT1Q92963 219 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 MTERF1Q99551 399 aaKnown RBP14.35□□□□□ -0.11
SPIDR-201ENST00000297423 CLEC4MQ9H2X3 399 aaPredicted RBP14.35□□□□□ -0.11
SPIDR-201ENST00000297423 RNF121Q9H920 327 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 EVA1BQ9NVM1 165 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 DLGAP4Q9Y2H0 992 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 CCNDBP1O95273 360 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 FCER2P06734 321 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 CCL5P13501 91 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 RAB8AP61006 207 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 CRTC2Q53ET0 693 aaPredicted RBP14.35□□□□□ -0.11
SPIDR-201ENST00000297423 FAM205BPQ63HN1 556 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 LRRC66Q68CR7 880 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 USP30Q70CQ3 517 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 CLSTN3Q9BQT9 956 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 BRINP2Q9C0B6 783 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 CCDC59Q9P031 241 aaKnown RBP14.35□□□□□ -0.11
SPIDR-201ENST00000297423 ATP6V1HQ9UI12 483 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 CRLS1Q9UJA2 301 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 FADS2P1A8MWK0 482 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 WBP4O75554 376 aaKnown RBP14.35□□□□□ -0.11
SPIDR-201ENST00000297423 NRIP1P48552 1158 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 MAN2A2P49641 1150 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 SMSP52788 366 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 FAPQ12884 760 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 CBLBQ13191 982 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 SUZ12Q15022 739 aaKnown RBP14.35□□□□□ -0.11
SPIDR-201ENST00000297423 ZNF280BQ86YH2 543 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 PJA1Q8NG27 643 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 TSGA13Q96PP4 275 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 ACTL8Q9H568 366 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 RLIMQ9NVW2 624 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 GRIP1Q9Y3R0 1128 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 BRWD1Q9NSI6 2320 aa14.35□□□□□ -0.11
SPIDR-201ENST00000297423 PLK4O00444 970 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 ARHGAP33O14559 1287 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 SLC25A14O95258 325 aaPredicted RBP14.34□□□□□ -0.11
SPIDR-201ENST00000297423 FGF1P05230 155 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 XPAP23025 273 aaPredicted RBP14.34□□□□□ -0.11
SPIDR-201ENST00000297423 RPA4Q13156 261 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 CTXN3Q4LDR2 81 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 ZC3H12BQ5HYM0 836 aaKnown RBP14.34□□□□□ -0.11
SPIDR-201ENST00000297423 AFTPHQ6ULP2 937 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 GPR149Q86SP6 731 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 LUZP2Q86TE4 346 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 ZSWIM9Q86XI8 627 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 DENND1CQ8IV53 801 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 AKAP1Q92667 903 aaKnown RBP eCLIP14.34□□□□□ -0.11
SPIDR-201ENST00000297423 SUSD3Q96L08 255 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 BCL7BQ9BQE9 202 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 FAM126AQ9BYI3 521 aaPredicted RBP14.34□□□□□ -0.11
SPIDR-201ENST00000297423 TM6SF2Q9BZW4 377 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 ANKHQ9HCJ1 492 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 AGO1Q9UL18 857 aaKnown RBP14.34□□□□□ -0.11
SPIDR-201ENST00000297423 TNPO3Q9Y5L0 923 aaKnown RBP14.34□□□□□ -0.11
SPIDR-201ENST00000297423 SPIN1Q9Y657 262 aaPredicted RBP14.34□□□□□ -0.11
SPIDR-201ENST00000297423 H3BQ06 376 aaPredicted RBP14.34□□□□□ -0.11
SPIDR-201ENST00000297423 EVI2BP34910 448 aa14.34□□□□□ -0.11
SPIDR-201ENST00000297423 SLC39A12Q504Y0 691 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms