RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 SLC35A5Q9BS91 424 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 NTMT1Q9BV86 223 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 ASPNQ9BXN1 380 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 CFL2Q9Y281 166 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 LYVE1Q9Y5Y7 322 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 PAPPA2Q9BXP8 1791 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 GON4LQ3T8J9 2241 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 UNC80Q8N2C7 3258 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 ZNF840PA6NDX5 716 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 PLK4O00444 970 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 C6orf47O95873 294 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 PRKAR2AP13861 404 aaKnown RBP12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 ANXA8P13928 327 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 CCR7P32248 378 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 CASP3P42574 277 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 GBX1Q14549 363 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 TBRG1Q3YBR2 411 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 MORN1Q5T089 497 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 GCNT6Q5T4J0 391 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 HMGN2P46Q86SG4 172 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 RNF180Q86T96 592 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 PPCDCQ96CD2 204 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 EID2BQ96D98 161 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 PHOX2BQ99453 314 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 TMEM246Q9BRR3 403 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 P2RY12Q9H244 342 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 MOV10Q9HCE1 1003 aaKnown RBP12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 PAQR5Q9NXK6 330 aaPredicted RBP12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 CCRL2O00421 344 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 IFNA14P01570 189 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 CATP04040 527 aaKnown RBP12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 FHP07954 510 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 SLC10A3P09131 477 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 CR2P20023 1033 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 SOX3P41225 446 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 SLC19A1P41440 591 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 RAB25P57735 213 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 CXCR4P61073 352 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 TRIM46Q7Z4K8 759 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 NRARPQ7Z6K4 114 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 BBS7Q8IWZ6 715 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 NPAS3Q8IXF0 933 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 CYP4Z2PQ8N1L4 340 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 B3GNT7Q8NFL0 401 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 GFM1Q96RP9 751 aaKnown RBP12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 DOHHQ9BU89 302 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 ZDHHC3Q9NYG2 299 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 TAS2R9Q9NYW1 312 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 IFT52Q9Y366 437 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 PCDHGA6Q9Y5G7 932 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 HSPE1-MOB4S4R3N1 261 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 CCDC88CQ9P219 2028 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 METTL15A6NJ78 407 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 FAM47E-STBD1D6RA91 191 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 FAM227AF5H4B4 570 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 SSX4O60224 188 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 CCNB2O95067 398 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 GJA1P17302 382 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 ATF6P18850 670 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 RGS6P49758 472 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 CRISP3P54108 245 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 PRKAG1P54619 331 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 PTPN5P54829 565 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 CSNK2BP67870 215 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 ELAVL2Q12926 359 aaKnown RBP12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 KIAA0040Q15053 153 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 LYPLAL1Q5VWZ2 237 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 CAPN13Q6MZZ7 669 aaPredicted RBP12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 PNCKQ6P2M8 343 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 RRM2BQ7LG56 351 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 TRMT11Q7Z4G4 463 aaKnown RBP12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 C19orf18Q8NEA5 215 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 P2RY13Q9BPV8 354 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 NIPSNAP1Q9BPW8 284 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 TMEM121BQ9BXQ6 578 aaPredicted RBP12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 MMP28Q9H239 520 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 OR51B5Q9H339 312 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 SP140LQ9H930 580 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 TVP23BQ9NYZ1 205 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 DKK3Q9UBP4 350 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 NDRG4Q9ULP0 352 aaKnown RBP12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 SSR3Q9UNL2 185 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 PCDHB11Q9Y5F2 797 aa12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 NYNRINQ9P2P1 1898 aaKnown RBP12.13□□□□□ -0.47
TMEM200A-201ENST00000296978 NPIPB15A6NHN6 443 aaPredicted RBP12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 KCNK2O95069 426 aa12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 EOMESO95936 686 aa12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 ITGA2P17301 1181 aa12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 HOXB6P17509 224 aaKnown RBP12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 AMD1P17707 334 aa12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 SNRPD1P62314 119 aaKnown RBP12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 RPS26P62854 115 aaKnown RBP12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 ALDH6A1Q02252 535 aaKnown RBP12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 DOC2AQ14183 400 aa12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 UGT8Q16880 541 aa12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 LRIT3Q3SXY7 679 aa12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 NEK10Q6ZWH5 1172 aa12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 CHPFQ8IZ52 775 aa12.12□□□□□ -0.47
TMEM200A-201ENST00000296978 SIX5Q8N196 739 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms