RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 TFF2Q03403 129 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 PRDX1Q06830 199 aaKnown RBP9.75□□□□□ -0.85
C9orf43-201ENST00000288462 RBBP5Q15291 538 aaKnown RBP9.75□□□□□ -0.85
C9orf43-201ENST00000288462 TMEM31Q5JXX7 168 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 DEPDC1Q5TB30 811 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 ABRAXAS1Q6UWZ7 409 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 R3HCC1LQ7Z5L2 792 aaKnown RBP9.75□□□□□ -0.85
C9orf43-201ENST00000288462 FAM86B1Q8N7N1 296 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 TMEM145Q8NBT3 493 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 GOT1L1Q8NHS2 421 aaPredicted RBP9.75□□□□□ -0.85
C9orf43-201ENST00000288462 HMGB4Q8WW32 186 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 POP5Q969H6 163 aaKnown RBP9.75□□□□□ -0.85
C9orf43-201ENST00000288462 SLC29A1Q99808 456 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 CENPKQ9BS16 269 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 XKR8Q9H6D3 395 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 PRM3Q9NNZ6 103 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 C8orf4Q9NR00 106 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 TBC1D29Q9UFV1 150 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 PCDHB11Q9Y5F2 797 aa9.75□□□□□ -0.85
C9orf43-201ENST00000288462 TRBC2A0A5B9 178 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 C7orf72A4D263 438 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 FAM149AA5PLN7 773 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 A6NCN8 305 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 ANKDD1BA6NHY2 528 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 SAC3D1A6NKF1 404 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 EIF4E1BA6NMX2 242 aaKnown RBP9.74□□□□□ -0.85
C9orf43-201ENST00000288462 VGLL3A8MV65 326 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 EVPLLA8MZ36 301 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 H7BY64 318 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 CLIC1O00299 241 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 SOCS2O14508 198 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 TXNDC9O14530 226 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 CREG1O75629 220 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 SMNDC1O75940 238 aaKnown RBP eCLIP9.74□□□□□ -0.85
C9orf43-201ENST00000288462 PRSS23O95084 383 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 LDLRP01130 860 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 C1QCP02747 245 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 UBTFL6P0CB48 400 aaPredicted RBP9.74□□□□□ -0.85
C9orf43-201ENST00000288462 CKMT2P17540 419 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 ENGP17813 658 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 IL1RNP18510 177 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 CD72P21854 359 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 TPP2P29144 1249 aaPredicted RBP9.74□□□□□ -0.85
C9orf43-201ENST00000288462 PEBP1P30086 187 aaKnown RBP9.74□□□□□ -0.85
C9orf43-201ENST00000288462 AKT2P31751 481 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 YPEL5P62699 121 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 GAB1Q13480 694 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 PDK3Q15120 406 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 FAM98BQ52LJ0 330 aaKnown RBP9.74□□□□□ -0.85
C9orf43-201ENST00000288462 CPZQ66K79 652 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 UGT2A3Q6UWM9 527 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 ENPP7Q6UWV6 458 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 Q6ZS52 159 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 SPRED1Q7Z699 444 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 ZZZ3Q8IYH5 903 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 ZNF687Q8N1G0 1237 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 PGBD3Q8N328 593 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 MFSD2AQ8NA29 543 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 VPS37AQ8NEZ2 397 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 SNX19Q92543 992 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 PRAP1Q96NZ9 151 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 SEPHS2Q99611 448 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 C9orf16Q9BUW7 83 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 CHID1Q9BWS9 393 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 SPATA9Q9BWV2 254 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 CHST8Q9H2A9 424 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 DCAF13Q9NV06 445 aaKnown RBP9.74□□□□□ -0.85
C9orf43-201ENST00000288462 ATAD3AQ9NVI7 634 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 AHSPQ9NZD4 102 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 ZNF639Q9UID6 485 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 PNMA8BQ9ULN7 279 aaPredicted RBP9.74□□□□□ -0.85
C9orf43-201ENST00000288462 AK5Q9Y6K8 562 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 V9GYQ6 96 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 SNRNP200O75643 2136 aaKnown RBP9.74□□□□□ -0.85
C9orf43-201ENST00000288462 EYSQ5T1H1 3165 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 PRAMEF33A0A0G2JMD5 474 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 FEZF1A0PJY2 475 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 ARHGAP10A1A4S6 786 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 TOR1BO14657 336 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 SCAMP1O15126 338 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 ACOX3O15254 700 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 NDUFS4O43181 175 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 KDM1AO60341 852 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 CPSF4O95639 269 aaKnown RBP9.74□□□□□ -0.85
C9orf43-201ENST00000288462 EML2O95834 649 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 GBAP04062 536 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 IGHV4-34P06331 123 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 KLK1P06870 262 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 HOXB6P17509 224 aaKnown RBP9.74□□□□□ -0.85
C9orf43-201ENST00000288462 PPIBP23284 216 aaKnown RBP9.74□□□□□ -0.85
C9orf43-201ENST00000288462 HTR1BP28222 390 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 BSGP35613 385 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 CCR5P51681 352 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 TAS2R50P59544 299 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 CYP4F2P78329 520 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 ABATP80404 500 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 KRT33BQ14525 404 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 NKG7Q16617 165 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 NRF1Q16656 503 aa9.74□□□□□ -0.85
C9orf43-201ENST00000288462 MPEG1Q2M385 716 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 569.2 ms