RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 CASP3P42574 277 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 ZFP36L2P47974 494 aaKnown RBP12.94□□□□□ -0.34
SCAF4-201ENST00000286835 ZNF45Q02386 682 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 NEK10Q6ZWH5 1172 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 ENTHD1Q8IYW4 607 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 MFSD4AQ8N468 514 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 ARL14EPQ8N8R7 260 aaPredicted RBP12.94□□□□□ -0.34
SCAF4-201ENST00000286835 AQP11Q8NBQ7 271 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 CCM2Q9BSQ5 444 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 SLC13A4Q9UKG4 626 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 SSR3Q9UNL2 185 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 UGT2A1Q9Y4X1 527 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 DNAH12Q6ZR08 3092 aa12.94□□□□□ -0.34
SCAF4-201ENST00000286835 CCDC85CA6NKD9 419 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 ITGAMP11215 1152 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 NCF4Q15080 339 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 ADGRF1Q5T601 910 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 CCDC149Q6ZUS6 474 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 ZNF300Q96RE9 604 aaPredicted RBP12.93□□□□□ -0.34
SCAF4-201ENST00000286835 TRPS1Q9UHF7 1281 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 FAM25AB3EWG3 89 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 FAM25CB3EWG5 89 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 FAM25GB3EWG6 89 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 PLK4O00444 970 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 IGFBP4P22692 258 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 HNF1BP35680 557 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 HMGCLP35914 325 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 NSG1P42857 185 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 PRKAG1P54619 331 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 C2orf80Q0P641 193 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 KEAP1Q14145 624 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 IQCCQ4KMZ1 466 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 TNFAIP8L2Q6P589 184 aaPredicted RBP12.93□□□□□ -0.34
SCAF4-201ENST00000286835 NUDT18Q6ZVK8 323 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 NRARPQ7Z6K4 114 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 ZSWIM9Q86XI8 627 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 NAGSQ8N159 534 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 PJA1Q8NG27 643 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 DUSP21Q9H596 190 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 COMMD3Q9UBI1 195 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 OR6C70A6NIJ9 312 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 DRGXA6NNA5 263 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 CLCA1A8K7I4 914 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 COCHO43405 550 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 SOX3P41225 446 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 HMGN2P46Q86SG4 172 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 ASCC1Q8N9N2 400 aaKnown RBP12.93□□□□□ -0.34
SCAF4-201ENST00000286835 PXYLP1Q8TE99 480 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 PIK3R3Q92569 461 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 ISG20Q96AZ6 181 aaKnown RBP12.93□□□□□ -0.34
SCAF4-201ENST00000286835 SLIRPQ9GZT3 109 aaKnown RBP12.93□□□□□ -0.34
SCAF4-201ENST00000286835 FBXO10Q9UK96 956 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 IFT52Q9Y366 437 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 F5P12259 2224 aa12.93□□□□□ -0.34
SCAF4-201ENST00000286835 CENPFP49454 3210 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 TGFB1P01137 390 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 IFNA14P01570 189 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 SSTR4P31391 388 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 RACK1P63244 317 aaKnown RBP12.92□□□□□ -0.34
SCAF4-201ENST00000286835 QPRTQ15274 297 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 SYCE2Q6PIF2 218 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 PLET1Q6UQ28 207 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 MMAAQ8IVH4 418 aaKnown RBP12.92□□□□□ -0.34
SCAF4-201ENST00000286835 GGHQ92820 318 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 SLC35B4Q969S0 331 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 FAM129BQ96TA1 746 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 HDHD2Q9H0R4 259 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 TVP23BQ9NYZ1 205 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 SMAD6O43541 496 aaKnown RBP12.92□□□□□ -0.34
SCAF4-201ENST00000286835 ZNF623O75123 536 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 PSIP1O75475 530 aaKnown RBP12.92□□□□□ -0.34
SCAF4-201ENST00000286835 CCNB2O95067 398 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 ZNF362Q5T0B9 420 aaPredicted RBP12.92□□□□□ -0.34
SCAF4-201ENST00000286835 IER5LQ5T953 404 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 LMNTD1Q8N9Z9 388 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 NACC2Q96BF6 587 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 C11orf49Q9H6J7 331 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 SP140LQ9H930 580 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 MKLN1Q9UL63 735 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 PPT2Q9UMR5 302 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 MIA3Q5JRA6 1907 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 FABP12A6NFH5 140 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 GRXCR2A6NFK2 248 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 J3KTA2 159 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 GFRA2O00451 464 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 KPNA3O00505 521 aaPredicted RBP12.92□□□□□ -0.34
SCAF4-201ENST00000286835 SSX4O60224 188 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 B4GALT3O60512 393 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 GUCY1B2O75343 617 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 CDRT1O95170 752 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 BPIP17213 487 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 TIE1P35590 1138 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 HNRNPFP52597 415 aaKnown RBP12.92□□□□□ -0.34
SCAF4-201ENST00000286835 SCARB2Q14108 478 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 GCNT6Q5T4J0 391 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 PNCKQ6P2M8 343 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 USP45Q70EL2 814 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 ING5Q8WYH8 240 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 PPCDCQ96CD2 204 aa12.92□□□□□ -0.34
SCAF4-201ENST00000286835 TMCO6Q96DC7 493 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms