RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 SYT12Q8IV01 421 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 TMCO5AQ8N6Q1 288 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 TTC29Q8NA56 475 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-201ENST00000277198 ZBTB8BQ8NAP8 495 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-201ENST00000277198 PHF10Q8WUB8 498 aaKnown RBP12.46□□□□□ -0.41
C9orf3-201ENST00000277198 FCGR1BQ92637 280 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 VOPP1Q96AW1 172 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 EPYCQ99645 322 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 RIBC2Q9H4K1 309 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 REEP1Q9H902 201 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 TBC1D17Q9HA65 648 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 VPS29Q9UBQ0 182 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 WNT16Q9UBV4 365 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 BTNL2Q9UIR0 455 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 ABCG2Q9UNQ0 655 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 SLC22A14Q9Y267 594 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 F5P12259 2224 aa12.46□□□□□ -0.41
C9orf3-201ENST00000277198 ANKRD12Q6UB98 2062 aa12.46□□□□□ -0.42
C9orf3-201ENST00000277198 QSOX1O00391 747 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 RGS10O43665 173 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 XPNPEP2O43895 674 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 MYO1DO94832 1006 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 FUCA1P04066 466 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 SRCP12931 536 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 CDH3P22223 829 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 CD6P30203 668 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 GDI1P31150 447 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 ASMTP46597 345 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 SPINT3P49223 89 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 WNT3P56703 355 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 POLR2LP62875 67 aaKnown RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 PPP1R8Q12972 351 aaKnown RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 FADDQ13158 208 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 CHIT1Q13231 466 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 GTF2H3Q13889 308 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 MAD2L1BPQ15013 274 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 UGT8Q16880 541 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 CEP68Q76N32 757 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 SLCO6A1Q86UG4 719 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 KLHDC8AQ8IYD2 350 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 VPS37AQ8NEZ2 397 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 ATL1Q8WXF7 558 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 C11orf24Q96F05 449 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 ZNF300Q96RE9 604 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 BRF2Q9HAW0 419 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 TRPV4Q9HBA0 871 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 SPATA6Q9NWH7 488 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 PDP1Q9P0J1 537 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 HCN4Q9Y3Q4 1203 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 SAMHD1Q9Y3Z3 626 aaKnown RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 PCDHB11Q9Y5F2 797 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 USP34Q70CQ2 3546 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 SCN8AQ9UQD0 1980 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 CLDN24A6NM45 220 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 H0YIV9 168 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 MITFO75030 526 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 POP4O95707 220 aaKnown RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 C9P02748 559 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 DCNP07585 359 aaKnown RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 ALOX5P09917 674 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 GLULP15104 373 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 ZNF30P17039 623 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 IDUAP35475 653 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 HNF4AP41235 474 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 MAPK9P45984 424 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 PXNP49023 591 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 IRF8Q02556 426 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 SIM2Q14190 667 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 CLCA4Q14CN2 919 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 TRIM16LQ309B1 348 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 ANXA8L1Q5VT79 327 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 MLIPQ5VWP3 458 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 EGFLAMQ63HQ2 1017 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 ASTLQ6HA08 431 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-201ENST00000277198 PTOV1Q86YD1 416 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 SYNPOQ8N3V7 929 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 WDR20Q8TBZ3 569 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 ASZ1Q8WWH4 475 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 EGLN2Q96KS0 407 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 SIGLEC11Q96RL6 698 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 P2RY13Q9BPV8 354 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 FAM83CQ9BQN1 747 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 KRT84Q9NSB2 600 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 ERVK-18Q9QC07 812 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 FBXO10Q9UK96 956 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 SH3BP1Q9Y3L3 701 aa12.45□□□□□ -0.42
C9orf3-201ENST00000277198 MYO1GB0I1T2 1018 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 STK25O00506 426 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 SLCO2B1O94956 709 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 COX7A2P14406 83 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 LHCGRP22888 699 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 PTX3P26022 381 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-201ENST00000277198 HALP42357 657 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 DCDC1P59894 354 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 PFN3P60673 137 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 VLDLRP98155 873 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 SLC14A1Q13336 389 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 ATP1A4Q13733 1029 aa12.44□□□□□ -0.42
C9orf3-201ENST00000277198 ELOAQ14241 798 aaKnown RBP12.44□□□□□ -0.42
C9orf3-201ENST00000277198 TEAD4Q15561 434 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms