RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 KRT33BQ14525 404 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 ERICH5Q6P6B1 374 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 ENPP7Q6UWV6 458 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 PHACTR4Q8IZ21 702 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 ANKRD53Q8N9V6 530 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 OR52E1Q8NGJ3 308 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 PDXPQ96GD0 296 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 AURKBQ96GD4 344 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 NRTNQ99748 197 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 YY1AP1Q9H869 796 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 POLMQ9NP87 494 aaPredicted RBP13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 ADAM29Q9UKF5 820 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 ICKQ9UPZ9 632 aa13.72□□□□□ -0.21
RTFDC1-201ENST00000023939 TRBC2A0A5B9 178 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 C1orf226A1L170 272 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 OR52A4PA6NMU1 304 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 H7BY64 318 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 TBX19O60806 448 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 SH3BGRLO75368 114 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 CLEC3AO75596 197 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 PRSS23O95084 383 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 PSMB5P28074 263 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 TDGQ13569 410 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 FAM98BQ52LJ0 330 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 CPZQ66K79 652 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 ZBTB49Q6ZSB9 765 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 SPRED1Q7Z699 444 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 ABI3BPQ7Z7G0 1075 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 ZNF687Q8N1G0 1237 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 SYNPOQ8N3V7 929 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 MFSD2AQ8NA29 543 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 TTLQ8NG68 377 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 CDC26Q8NHZ8 85 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 FIG4Q92562 907 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 ZNF764Q96H86 408 aaPredicted RBP13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 PRAP1Q96NZ9 151 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 QRFPRQ96P65 431 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 GAS2L1Q99501 681 aaPredicted RBP13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 TBCDQ9BTW9 1192 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 C9orf16Q9BUW7 83 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 SARGQ9BW04 601 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 CHID1Q9BWS9 393 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 ZNF717Q9BY31 904 aaPredicted RBP13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 TWSG1Q9GZX9 223 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 MAGIXQ9H6Y5 334 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 DCAF13Q9NV06 445 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 TRNAU1APQ9NX07 287 aaKnown RBP13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 SCHIP1Q9P0W5 487 aaPredicted RBP13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 ZNF639Q9UID6 485 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 CORO2BQ9UQ03 480 aa13.71□□□□□ -0.21
RTFDC1-201ENST00000023939 IGKV1-8A0A0C4DH67 115 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 CREG1O75629 220 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 CCNDBP1O95273 360 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 LDLRP01130 860 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 KLK1P06870 262 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 LYNP07948 512 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 CHRNB1P11230 501 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 ENGP17813 658 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 TPP2P29144 1249 aaPredicted RBP13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 NUDT1P36639 197 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 CHRNB3Q05901 458 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 SMAD2Q15796 467 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 TPRG1LQ5T0D9 272 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 TMTC4Q5T4D3 741 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 ZNF621Q6ZSS3 439 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 SYT13Q7L8C5 426 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 PAGE2Q7Z2X7 111 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 ZNF551Q7Z340 670 aaPredicted RBP13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 CLECL1Q8IZS7 167 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 EID3Q8N140 333 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 C10orf111Q8N326 155 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 GALNT4Q8N4A0 578 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 NATD1Q8N6N6 113 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 HMGB4Q8WW32 186 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 SNX19Q92543 992 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 SLC29A1Q99808 456 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 CIB1Q99828 191 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 CENPKQ9BS16 269 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 OSBPL11Q9BXB4 747 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 XKR8Q9H6D3 395 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 PRM3Q9NNZ6 103 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 TMEM184CQ9NVA4 438 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 OR6C2Q9NZP2 312 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 ZNF282Q9UDV7 671 aaPredicted RBP13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 TBC1D29Q9UFV1 150 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 DMTF1Q9Y222 760 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 AP4B1Q9Y6B7 739 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 AP1M2Q9Y6Q5 423 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 C7orf72A4D263 438 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 A6NCN8 305 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 PRAMEF26H0Y7S4 382 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 H0Y8X5 98 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 PLPP1O14494 284 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 ACOX3O15254 700 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 GPR37L1O60883 481 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 SHMT2P34897 504 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 BSGP35613 385 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 SOX11P35716 441 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 ARFIP1P53367 373 aa13.7□□□□□ -0.22
RTFDC1-201ENST00000023939 C2orf80Q0P641 193 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 271.8 ms