RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Lrrtm4Q80XG9 590 aa8.21□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 Amigo2Q80ZD9 519 aa8.21□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 Dcun1d3Q8K0V2 304 aa8.21□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 CenpiQ8K1K4 746 aa8.21□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 Vmn1r33Q8R2E0 305 aa8.21□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 Rbms2Q8VC70 383 aaKnown RBP8.21□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 Trim13Q9CYB0 407 aa8.21□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 Upk1aQ9D132 257 aa8.21□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 DlstQ9D2G2 454 aa8.21□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 Senp8Q9D2Z4 221 aa8.21□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 Ccdc3Q9D6Y1 273 aa8.21□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 Amdhd1Q9DBA8 426 aa8.21□□□□□ -1.09
Sf3b1-201ENSMUST00000027127 Dicer1Q8R418 1916 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Igkv5-39A0A0G2JDV4 115 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Rnf165E9QAU8 347 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Gm7945F6QI24 236 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Fmo6J3QMN6 532 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Gm13128L7MU96 475 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Psmc3ipO35047 217 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Sh3pxd2aO89032 1124 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 BdnfP21237 249 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 InaP46660 501 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Tia1P52912 386 aaKnown RBP8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 ChatQ03059 641 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Defb23Q30KP0 166 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Ap5b1Q3TAP4 876 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Elavl3Q60900 367 aaKnown RBP8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Rbbp4Q60972 425 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Bcap31Q61335 245 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Pik3c3Q6PF93 887 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Prr14Q7TPN9 612 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Lair1Q8BG84 263 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Fam131aQ8BWU3 361 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Cstf2tQ8C7E9 632 aaKnown RBP8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Slc22a17Q9D9E0 401 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Thap11Q9JJD0 305 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Man1b1A2AJ15 658 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Zfp969A2ART2 485 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Zfp973A2BE20 318 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Gm340F6RGI3 1242 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Mup4P11590 178 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 BgnP28653 369 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Sox2P48432 319 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 OxtrP97926 388 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Apoa1Q00623 264 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Sim1Q61045 765 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Trim50Q810I2 483 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Slc6a15Q8BG16 729 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Gm42417Q8K1D0 126 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Zcchc9Q8R1J3 271 aaKnown RBP8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Cbr4Q91VT4 236 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 HhatlQ9D1G3 503 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Zdhhc21Q9D270 265 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 SpaarA0A1B0GSZ0 75 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Tsc22d2E9Q7M2 769 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Fbrsl1E9Q9T0 1031 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Gtf2h4O70422 463 aaKnown RBP8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Chrm4P32211 479 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Ankdd1bQ14DN9 521 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Pwwp2aQ69Z61 730 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Kctd11Q8K485 232 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Mptx1Q8R1M8 219 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Fam45aQ9D8N2 357 aa8.21□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 CercamA3KGW5 592 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Gm597E9Q8J5 896 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Mpzl2O70255 215 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 GcatO88986 416 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 FhitO89106 150 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 TigitP86176 249 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Scn1bP97952 218 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Mvb12aQ78HU3 271 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Guf1Q8C3X4 651 aaKnown RBP8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Swi5Q8K3D3 89 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 SuoxQ8R086 546 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Rprd1bQ9CSU0 326 aaKnown RBP8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Ccdc81Q9D5W4 654 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Zfp236S4R299 1847 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Vmn2r35E9Q7U8 861 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Traf6P70196 530 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Fam98aQ3TJZ6 515 aaKnown RBP8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Brf2Q3UAW9 420 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Acsm3Q3UNX5 580 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Stox2Q499E5 926 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Zc3h12aQ5D1E7 596 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Map2k2Q63932 401 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Olfr384Q7TRX8 312 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Znf410Q8BKX7 478 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Gpr61Q8C010 449 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Zcchc14Q8VIG0 956 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Tmem150aQ91WN2 271 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Pfdn1Q9CWM4 122 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Fabp12Q9DAK4 132 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Zar1lC3VD30 291 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Gm4788E9Q8B5 879 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Hsd17b10O08756 261 aaKnown RBP8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Prdx1P35700 199 aaKnown RBP8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Ipcef1Q5DU31 406 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 BadQ61337 204 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Hfe2Q7TQ32 420 aa8.2□□□□□ -1.1
Sf3b1-201ENSMUST00000027127 Clec4a3Q8JZX6 237 aa8.2□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 35.7 ms