RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Abhd4Q8VD66 342 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Pcdhga9Q91XX9 932 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Tnfaip8Q921Z5 198 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Mthfd1Q922D8 935 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Cst9Q9Z0H6 137 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Kiaa0100Q5SYL3 2234 aa15.88■□□□□ 0.13
Shh-201ENSMUST00000002708 Chil5A0A0G2JDS2 431 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm5565A0A0G2JGB2 317 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Rhox2bA2A447 191 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Rhox2cA2AWL9 191 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Slc32a1O35633 525 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Vti1bO88384 232 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Acod1P54987 488 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 CdonQ32MD9 1250 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Fstl1Q62356 306 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 1700001J03RikQ80ZR8 219 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Ubp1Q811S7 540 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Tigd4Q8BUZ3 513 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Abhd18Q8C1A9 464 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Sirt5Q8K2C6 310 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Cdc16Q8R349 620 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Olfr96Q8VFE3 313 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Recql5Q8VID5 982 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Vmp1Q99KU0 406 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Aph1cQ9DCZ9 258 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Dpysl5Q9EQF6 564 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Fbxo8Q9QZN3 319 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm42688A0A0R3P9D1 673 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm21885A0A286YDN8 145 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm12695A2AGB2 545 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Btnl4A2CG29 586 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 4930595M18RikA2RRY9 829 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Vmn2r92L7N2A4 860 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Mkln1O89050 735 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 GuloP58710 440 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 ChatQ03059 641 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Tmem184cQ3TPR7 525 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Taar8aQ5QD07 344 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Igsf5Q7TSN7 370 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Mup21Q80YX8 181 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Dtd2Q8BHA3 168 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Rbm45Q8BHN5 476 aaKnown RBP15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Zc3h14Q8BJ05 735 aaKnown RBP15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Ndrg4Q8BTG7 352 aaKnown RBP15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 AcppQ8CE08 381 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Utp6Q8VCY6 597 aaKnown RBP15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Olfr478Q8VG04 314 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Slc2a10Q8VHD6 536 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Elmod3Q91YP6 381 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Tmem246Q91YV9 403 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Arpc5lQ9D898 153 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Trpv4Q9EPK8 871 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Ern1Q9EQY0 977 aa15.87■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm13089A2AGW7 455 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Olfr1253A2AUA2 318 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Olfr287E9PZS7 322 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Vmn1r184E9Q2N4 314 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Kcnk1O08581 336 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Dgcr6O35347 198 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 HccsP53702 272 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 GcgP55095 180 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Snrpd1P62315 119 aaKnown RBP15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 TigitP86176 249 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 VegfcP97953 415 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Olfr1251Q7TQZ3 318 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Q8BH50 245 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Ifnl3Q8CGK6 193 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Pih1d2Q8CHR9 315 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Crlf2Q8CII9 359 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Slco3a1Q8R3L5 710 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Rbm47Q91WT8 590 aaKnown RBP15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 St3gal4Q91Y74 333 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Tmed11Q9D2R4 215 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Pop5Q9DB28 169 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Yipf5Q9EQQ2 257 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Cdc20Q9JJ66 499 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Fbxo47A2A6H3 451 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm14781A2A9Q9 366 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Olfr742A2RTP5 311 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Gm44G3UW88 330 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Vmn1r31L7N2F1 303 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Rrm2P11157 390 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Zfp37P17141 594 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 GiprQ0P543 460 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Mageb5Q14AN0 366 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Dlgap3Q6PFD5 977 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Olfr503Q7TRU8 323 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Mfn2Q80U63 757 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Sh3rf2Q8BZT2 735 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Mettl22Q8R1C6 393 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Mapk8Q91Y86 384 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Scpep1Q920A5 452 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Spred2Q924S7 410 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 MlycdQ99J39 492 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Trim12aQ99PQ1 284 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Cxxc1Q9CWW7 660 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Mgme1Q9CXC3 338 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Gtf2h2Q9JIB4 396 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Cpne6Q9Z140 557 aa15.86■□□□□ 0.13
Shh-201ENSMUST00000002708 Mcm3apQ9WUU9 1971 aa15.86■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 64.1 ms