RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 CELSR1Q9NYQ6 3014 aa9.02□□□□□ -0.97
PHGDH-228ENST00000641847 A0A1B0GTL3 188 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 A1L4Q6 167 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 EFCAB7A8K855 629 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 C2orf74A8MZ97 194 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 C9orf172C9J069 976 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 AGRPO00253 132 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 MATN2O00339 956 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 CLGNO14967 610 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 DUX1O43812 170 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 PRICKLE3O43900 615 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-228ENST00000641847 CRCPO75575 148 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 CDH1P12830 882 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 PNLIPP16233 465 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 UGT2B7P16662 529 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 NPPBP16860 134 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 AMD1P17707 334 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 GNAZP19086 355 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 ALDH4A1P30038 563 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 PRDX3P30048 256 aaKnown RBP9.01□□□□□ -0.97
PHGDH-228ENST00000641847 GPR3P46089 330 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 PKNOX1P55347 436 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 OR1D5P58170 312 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 PPP1CAP62136 330 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 MC1RQ01726 317 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 ZFP36L1Q07352 338 aaKnown RBP9.01□□□□□ -0.97
PHGDH-228ENST00000641847 GALNT1Q10472 559 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-228ENST00000641847 TRAF3Q13114 568 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 KIR2DS3Q14952 304 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 SF1Q15637 639 aaKnown RBP9.01□□□□□ -0.97
PHGDH-228ENST00000641847 SH2D4BQ5SQS7 431 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 CATSPEREQ5SY80 951 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 NKAIN2Q5VXU1 208 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 FAM219BQ5XKK7 198 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 SPESP1Q6UW49 350 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 SPRED1Q7Z699 444 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 SYVN1Q86TM6 617 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 TRIM73Q86UV7 250 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 C17orf64Q86WR6 236 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 MYLK4Q86YV6 388 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-228ENST00000641847 CRLF3Q8IUI8 442 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 LRRC34Q8IZ02 419 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 ADGRG4Q8IZF6 3080 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 CACNA2D3Q8IZS8 1091 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 ZNF781Q8N8C0 355 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 OR2L3Q8NG85 312 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 OR4F6Q8NGB9 312 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 OR2A1Q8NGT9 310 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 FLVCR1-AS1Q8TAF5 88 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 NKD1Q969G9 470 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 NEIL2Q969S2 332 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 SLC22A18Q96BI1 424 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 TAAR9Q96RI9 348 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 SORT1Q99523 831 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 TWSG1Q9GZX9 223 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 SLC6A20Q9NP91 592 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 MARCOQ9UEW3 520 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-228ENST00000641847 TRPS1Q9UHF7 1281 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 ADAM21Q9UKJ8 722 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 RAP2CQ9Y3L5 183 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 KCNE2Q9Y6J6 123 aa9.01□□□□□ -0.97
PHGDH-228ENST00000641847 IGHV1OR21-1A0A087WYE8 117 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 A0A0J9YY10 115 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 A0A1W2PQM1 296 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 TMEM233B4DJY2 109 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 AZIN1O14977 448 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 CASC3O15234 703 aaKnown RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 PRAMEF4O60810 478 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 EDF1O60869 148 aaKnown RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 SHOX2O60902 331 aaPredicted RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 OR4F21O95013 312 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 SNUPNO95149 360 aaKnown RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 ESRRBO95718 433 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 EBLN1P0CF75 366 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 LIFP15018 202 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 VARSP26640 1264 aaKnown RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 CMPK1P30085 196 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 ETV5P41161 510 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 MLLT10P55197 1068 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 YBX1P67809 324 aaKnown RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 SH3BP2P78314 561 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 GPLD1P80108 840 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 ABATP80404 500 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 IRF8Q02556 426 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 PRDX1Q06830 199 aaKnown RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 CHIT1Q13231 466 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 SLBPQ14493 270 aaKnown RBP eCLIP9□□□□□ -0.97
PHGDH-228ENST00000641847 SLC5A12Q1EHB4 618 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 AMZ1Q400G9 498 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 GGTA1PQ4G0N0 100 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 XKR6Q5GH73 641 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 PRAMEF9Q5VWM5 478 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 KANK2Q63ZY3 851 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 ATG9BQ674R7 924 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 IRGCQ6NXR0 463 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 LETMD1Q6P1Q0 360 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 NXPE4Q6UWF7 544 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 SLCO4C1Q6ZQN7 724 aa9□□□□□ -0.97
PHGDH-228ENST00000641847 MAMDC2Q7Z304 686 aaPredicted RBP9□□□□□ -0.97
PHGDH-228ENST00000641847 ADCK2Q7Z695 626 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms