RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 GPR107Q5VW38 600 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 FAM46CQ5VWP2 391 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 NXPE4Q6UWF7 544 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 LCTLQ6UWM7 567 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 PTOV1Q86YD1 416 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 CROCCP3Q8IVE0 287 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 C11orf65Q8NCR3 313 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 CHDHQ8NE62 594 aaPredicted RBP11.67□□□□□ -0.54
CLN8-212ENST00000637083 OR4A15Q8NGL6 344 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 OR13F1Q8NGS4 319 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 GOT1L1Q8NHS2 421 aaPredicted RBP11.67□□□□□ -0.54
CLN8-212ENST00000637083 ZFP90Q8TF47 636 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 SMARCD2Q92925 531 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 SAMD11Q96NU1 681 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 APOL4Q9BPW4 351 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 TRIT1Q9H3H1 467 aaKnown RBP11.67□□□□□ -0.54
CLN8-212ENST00000637083 DMRT3Q9NQL9 472 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 UTS2RQ9UKP6 389 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 FAF1Q9UNN5 650 aaPredicted RBP11.67□□□□□ -0.54
CLN8-212ENST00000637083 NUP210Q8TEM1 1887 aaPredicted RBP11.67□□□□□ -0.54
CLN8-212ENST00000637083 C1orf226A1L170 272 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 PIPSLA2A3N6 862 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 KLHL33A6NCF5 533 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 MYO1GB0I1T2 1018 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 BCKDKO14874 412 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 SPINT1O43278 529 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 SUV39H1O43463 412 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 MMP20O60882 483 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 PAPLNO95428 1278 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 ETHE1O95571 254 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 B3GALT4O96024 378 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 SEMG1P04279 462 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 CXCR2P25025 360 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 PTX3P26022 381 aaPredicted RBP11.67□□□□□ -0.54
CLN8-212ENST00000637083 PCGF2P35227 344 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 YAP1P46937 504 aaKnown RBP11.67□□□□□ -0.54
CLN8-212ENST00000637083 ITGA1P56199 1179 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 ISL1P61371 349 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 TAP2Q03519 686 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 CAMK2GQ13555 558 aaPredicted RBP11.67□□□□□ -0.54
CLN8-212ENST00000637083 RGNQ15493 299 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 CYP2A13Q16696 494 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 IKBIPQ70UQ0 350 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 ZNF551Q7Z340 670 aaPredicted RBP11.67□□□□□ -0.54
CLN8-212ENST00000637083 NATD1Q8N6N6 113 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 GPR156Q8NFN8 814 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 ZNF566Q969W8 418 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 NXPE3Q969Y0 559 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 HSH2DQ96JZ2 352 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 HDAC8Q9BY41 377 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 MYNNQ9NPC7 610 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 EBF1Q9UH73 591 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 TMEFF2Q9UIK5 374 aaPredicted RBP11.67□□□□□ -0.54
CLN8-212ENST00000637083 WBP11Q9Y2W2 641 aaKnown RBP11.67□□□□□ -0.54
CLN8-212ENST00000637083 TPRKBQ9Y3C4 175 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 DNMT3AQ9Y6K1 912 aaPredicted RBP11.67□□□□□ -0.54
CLN8-212ENST00000637083 U3KQV3 271 aa11.67□□□□□ -0.54
CLN8-212ENST00000637083 SEC14L2O76054 403 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 HLA-EP13747 358 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 MYOGP15173 224 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 PRKACGP22612 351 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 VIPR2P41587 438 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 SLC6A11P48066 632 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 CXCR4P61073 352 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 CD47Q08722 323 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 FADDQ13158 208 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 ZNF234Q14588 700 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 ARHGAP19Q14CB8 494 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 MEP1AQ16819 746 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 CATSPEREQ5SY80 951 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 TRIM40Q6P9F5 258 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 ADAMTSL4Q6UY14 1074 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 TMEM179BQ7Z7N9 219 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 HS3ST5Q8IZT8 346 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 METTL4Q8N3J2 472 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 RAB2BQ8WUD1 216 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 FOXJ1Q92949 421 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 PPCDCQ96CD2 204 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 THAP11Q96EK4 314 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 FAM129BQ96TA1 746 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 FANCEQ9HB96 536 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 SCN3BQ9NY72 215 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 KIF17Q9P2E2 1029 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 GULP1Q9UBP9 304 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 CIDEBQ9UHD4 219 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 SAMHD1Q9Y3Z3 626 aaKnown RBP11.66□□□□□ -0.54
CLN8-212ENST00000637083 NOTCH4Q99466 2003 aa11.66□□□□□ -0.54
CLN8-212ENST00000637083 H3BMQ9 156 aa11.65□□□□□ -0.54
CLN8-212ENST00000637083 MRPS14O60783 128 aaKnown RBP11.65□□□□□ -0.54
CLN8-212ENST00000637083 JRKO75564 520 aa11.65□□□□□ -0.54
CLN8-212ENST00000637083 IFNA14P01570 189 aa11.65□□□□□ -0.54
CLN8-212ENST00000637083 CDK4P11802 303 aa11.65□□□□□ -0.54
CLN8-212ENST00000637083 ZNF8P17098 575 aaPredicted RBP11.65□□□□□ -0.54
CLN8-212ENST00000637083 ACADLP28330 430 aa11.65□□□□□ -0.54
CLN8-212ENST00000637083 SERPINB1P30740 379 aa11.65□□□□□ -0.54
CLN8-212ENST00000637083 PIGAP37287 484 aa11.65□□□□□ -0.54
CLN8-212ENST00000637083 IL5RAQ01344 420 aa11.65□□□□□ -0.54
CLN8-212ENST00000637083 FCHO2Q0JRZ9 810 aa11.65□□□□□ -0.54
CLN8-212ENST00000637083 FAM78AQ5JUQ0 283 aa11.65□□□□□ -0.54
CLN8-212ENST00000637083 PRAMEF14Q5SWL7 426 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms