RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ZNF558Q96NG5 402 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 NECTIN4Q96NY8 510 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 OLFM1Q99784 485 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 VGLL1Q99990 258 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 GTPBP2Q9BX10 602 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 VN1R1Q9GZP7 353 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 NYXQ9GZU5 481 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 LAT2Q9GZY6 243 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 MAF1Q9H063 256 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 RAB6CQ9H0N0 254 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 UPF3AQ9H1J1 476 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 WNT5BQ9H1J7 359 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 PPIL3Q9H2H8 161 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 SNX25Q9H3E2 840 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 CNOT10Q9H9A5 744 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 FGF22Q9HCT0 170 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 SPHK2Q9NRA0 654 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 SERINC1Q9NRX5 453 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 GKN1Q9NS71 199 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 FGF21Q9NSA1 209 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 PLCXD1Q9NUJ7 323 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 P4HTMQ9NXG6 502 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 NSMCE4AQ9NXX6 385 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 HAO2Q9NYQ3 351 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 OR6C2Q9NZP2 312 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 FLRT3Q9NZU0 649 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 BCCIPQ9P287 314 aaKnown RBP eCLIP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 DDX25Q9UHL0 483 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ZDHHC2Q9UIJ5 367 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 RASAL2Q9UJF2 1139 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ACAD8Q9UKU7 415 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 PPP1R3CQ9UQK1 317 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 EXOGQ9Y2C4 368 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 WDR37Q9Y2I8 494 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 TRPV2Q9Y5S1 764 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 SNX8Q9Y5X2 465 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 RPS6KL1Q9Y6S9 549 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 FAM169AQ9Y6X4 670 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 R4GN57 208 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 NUP210LQ5VU65 1888 aa0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF106Q9H2Y7 1883 aaKnown RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 MUC22E2RYF6 1773 aaPredicted RBP0.98□□□□□ -2.25
SMARCB1-209ENST00000635578 ANAPC1Q9H1A4 1944 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PRRC2AP48634 2157 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PLXNA2O75051 1894 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 SOS1Q07889 1333 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 RPGRIP1LQ68CZ1 1315 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 UBN2Q6ZU65 1347 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 EVC2Q86UK5 1308 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 TTC21AQ8NDW8 1320 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 USP42Q9H9J4 1324 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 DOCK9Q9BZ29 2069 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 MYO10Q9HD67 2058 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 LOC102723996A0A087X1L8 192 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 EDDM13A0A1B0GTR0 161 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 A0A1W2PN81 502 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 SYNDIG1LA6NDD5 238 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 AGAP14A8MT82 685 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 A8MU10 97 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 SNURFLB1AK76 121 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PRR32B1ATL7 298 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 H7C423 109 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 K7ENM7 598 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 KLF11O14901 512 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PAPSS1O43252 624 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 FIBPO43427 364 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 RPS6KA5O75582 802 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 ERAL1O75616 437 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CREG1O75629 220 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 DFFBO76075 338 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 AP2A2O94973 939 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 ACSL3O95573 720 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CLDN1O95832 211 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 FRMD6-AS1P0C7T7 363 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 FAM157CP0CG43 387 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 STAG3L1P0CL83 205 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 MYBL1P10243 752 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 IRF2P14316 349 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 EFNA1P20827 205 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CA4P22748 312 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CA6P23280 308 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 EEF1B2P24534 225 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 OXTRP30559 389 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 SLC6A6P31641 620 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 HSPA4P34932 840 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CHRNA7P36544 502 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 MMP12P39900 470 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CETN2P41208 172 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 WNT5AP41221 380 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CRKLP46109 303 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CSE1LP55060 971 aaKnown RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PAX9P55771 341 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 IFI35P80217 286 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 MS4A2Q01362 244 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 GCNT1Q02742 428 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 NUCB1Q02818 461 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PPARDQ03181 441 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 CXCL9Q07325 125 aa0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 PNRC1Q12796 327 aaPredicted RBP0.97□□□□□ -2.25
SMARCB1-209ENST00000635578 AIMP1Q12904 312 aaKnown RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms