RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 RUNX1T1Q06455 604 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 KLC1Q07866 573 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 NPRL3Q12980 569 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 TRAF3Q13114 568 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 PRKAA1Q13131 559 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 LRRC26Q2I0M4 334 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 SETMARQ53H47 684 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 TMEM270Q6UE05 265 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 PLXDC2Q6UX71 529 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 KCTD9Q7L273 389 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 TMEM219Q86XT9 240 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 ODF3L1Q8IXM7 274 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 ARHGAP24Q8N264 748 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 RASGEF1AQ8N9B8 481 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 TRIML1Q8N9V2 468 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 DBF4BQ8NFT6 615 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 ASB5Q8WWX0 329 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 PGM2Q96G03 612 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 EEF2KMTQ96G04 330 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 RAD9AQ99638 391 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 PI4K2AQ9BTU6 479 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 LSG1Q9H089 658 aaKnown RBP4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 AKIRIN1Q9H9L7 192 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 TRPC7Q9HCX4 862 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 Q9N2K0 584 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 DNAJC4Q9NNZ3 241 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 OCIAD1Q9NX40 245 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 HYPKQ9NX55 129 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 DBF4Q9UBU7 674 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 ODF2LQ9ULJ1 636 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 STX8Q9UNK0 236 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 FRMPD3Q5JV73 1810 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 ZNF521Q96K83 1311 aa4.71□□□□□ -1.66
TRAPPC9-216ENST00000634178 A0A1B0GUL6 1792 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 MAGEA13PA6NCF6 341 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 CD8B2A6NJW9 211 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 GAPDHSO14556 408 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 FLRT2O43155 660 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 ST8SIA3O43173 380 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 SLC16A8O95907 504 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 SMIM18P0DKX4 95 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 HSPA5P11021 654 aaKnown RBP4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 ITGA2P17301 1181 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 TKTP29401 623 aaKnown RBP4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 CCND3P30281 292 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 MNDAP41218 407 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 NPBWR1P48145 328 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 NT5C2P49902 561 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 NANOS3P60323 173 aaKnown RBP4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 RELQ04864 619 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 GAGE5Q13069 117 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 GAGE6Q13070 117 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 RPS6KA1Q15418 735 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 PTGISQ16647 500 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 PHKG1Q16816 387 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 TATDN1Q6P1N9 297 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 FAM171BQ6P995 826 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 CNSTQ6PJW8 725 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 ZNF517Q6ZMY9 492 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 IQCF1Q8N6M8 205 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 NPEPL1Q8NDH3 523 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 LPCAT1Q8NF37 534 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 ELP5Q8TE02 316 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 NTN5Q8WTR8 489 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 IRGQQ8WZA9 623 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 SNX21Q969T3 373 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 SNRNP40Q96DI7 357 aaKnown RBP4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 LINGO1Q96FE5 620 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 BICD1Q96G01 975 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 KLHL5Q96PQ7 755 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 PLEKHF1Q96S99 279 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 SLC29A3Q9BZD2 475 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 ARRDC1-AS1Q9H2J1 176 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 PNNQ9H307 717 aaKnown RBP4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 SRD5A3Q9H8P0 318 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 KCNS2Q9ULS6 477 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 PA2G4Q9UQ80 394 aaKnown RBP4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 JRKLQ9Y4A0 524 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 CHD7Q9P2D1 2997 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 CHD9Q3L8U1 2897 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 RLFQ13129 1914 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 AK9Q5TCS8 1911 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 MYO9BQ13459 2157 aa4.7□□□□□ -1.66
TRAPPC9-216ENST00000634178 PLXNB2O15031 1838 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 WDFY4Q6ZS81 3184 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 TEX13DA0A0J9YY54 714 aaPredicted RBP4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 DNAJC9-AS1A6NH13 148 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 HNRNPCL2B2RXH8 293 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 PLOD2O00469 737 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 SYNGR3O43761 229 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 SNX3O60493 162 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 OLFM2O95897 454 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 IER3P46695 156 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 KCNJ1P48048 391 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 SULT2A1Q06520 285 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 C17orf67Q0P5P2 114 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 SNTA1Q13424 505 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 SHHQ15465 462 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 IQCCQ4KMZ1 466 aa4.69□□□□□ -1.66
TRAPPC9-216ENST00000634178 SLC39A12Q504Y0 691 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms