RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 PRAMEF9Q5VWM5 478 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 LETMD1Q6P1Q0 360 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 ZCCHC23Q6ZST2 131 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 SYVN1Q86TM6 617 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 CSNK1A1LQ8N752 337 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 CDYL2Q8N8U2 506 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 CCT6BQ92526 530 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 ZNF501Q96CX3 271 aaPredicted RBP11.03□□□□□ -0.64
PTPN7-219ENST00000629151 MVB12AQ96EY5 273 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 CMTM7Q96FZ5 175 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 METTL2AQ96IZ6 378 aaKnown RBP11.03□□□□□ -0.64
PTPN7-219ENST00000629151 SERPINI1Q99574 410 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 NDC1Q9BTX1 674 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 FAM117AQ9C073 453 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 ROGDIQ9GZN7 287 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 BRF2Q9HAW0 419 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 PRM3Q9NNZ6 103 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 IRAK4Q9NWZ3 460 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 OCIAD1Q9NX40 245 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 AHSPQ9NZD4 102 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 CDC14AQ9UNH5 594 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 NEUROG3Q9Y4Z2 214 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 PCDHGA7Q9Y5G6 932 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 SLC22A7Q9Y694 548 aa11.03□□□□□ -0.64
PTPN7-219ENST00000629151 PCNX2A6NKB5 2137 aa11.02□□□□□ -0.64
PTPN7-219ENST00000629151 A0A088AWK7 358 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 FEZF1A0PJY2 475 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 HYKKA2RU49 373 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 PPP6CO00743 305 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 UBFD1O14562 309 aaKnown RBP11.02□□□□□ -0.65
PTPN7-219ENST00000629151 PRAMEF10O60809 474 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 SNNO75324 88 aaPredicted RBP11.02□□□□□ -0.65
PTPN7-219ENST00000629151 DXOO77932 396 aaKnown RBP11.02□□□□□ -0.65
PTPN7-219ENST00000629151 PIM1P11309 404 aaPredicted RBP11.02□□□□□ -0.65
PTPN7-219ENST00000629151 PCNAP12004 261 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 PCSK2P16519 638 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 TSPAN8P19075 237 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 CD22P20273 847 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 ZNF10P21506 573 aaPredicted RBP11.02□□□□□ -0.65
PTPN7-219ENST00000629151 MDH1P40925 334 aaKnown RBP11.02□□□□□ -0.65
PTPN7-219ENST00000629151 TSFMP43897 325 aaKnown RBP11.02□□□□□ -0.65
PTPN7-219ENST00000629151 ATP1A2P50993 1020 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 VSX2P58304 361 aaPredicted RBP11.02□□□□□ -0.65
PTPN7-219ENST00000629151 MEF2AQ02078 507 aaPredicted RBP11.02□□□□□ -0.65
PTPN7-219ENST00000629151 CYP4F3Q08477 520 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 CUL3Q13618 768 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 KCNAB1Q14722 419 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 RTP5Q14D33 572 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 GPR19Q15760 415 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 PRTGQ2VWP7 1150 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 ABHD13Q7L211 337 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 CRLF3Q8IUI8 442 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 ANKRD53Q8N9V6 530 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 ZNF740Q8NDX6 193 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 HUS1BQ8NHY5 278 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 WDR20Q8TBZ3 569 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 ZNF473Q8WTR7 871 aaKnown RBP11.02□□□□□ -0.65
PTPN7-219ENST00000629151 SELENOMQ8WWX9 145 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 USP7Q93009 1102 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 C7orf26Q96N11 449 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 LRFN5Q96NI6 719 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 CDK15Q96Q40 435 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 DPH2Q9BQC3 489 aaPredicted RBP11.02□□□□□ -0.65
PTPN7-219ENST00000629151 SLC7A5P2Q9GIP4 190 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 VTI1BQ9UEU0 232 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 PISDQ9UG56 409 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 ZNF225Q9UK10 706 aa11.02□□□□□ -0.65
PTPN7-219ENST00000629151 LOC105369274A0A096LPK9 316 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 LOC102723532A0A0G2JNH3 316 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 LRIT2A6NDA9 550 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 SLC28A1O00337 649 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 MANBAO00462 879 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 NDUFS4O43181 175 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 SEMA3DO95025 777 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 TNFSF15O95150 251 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 EIF2S1P05198 315 aaKnown RBP11.01□□□□□ -0.65
PTPN7-219ENST00000629151 KLK3P07288 261 aaPredicted RBP11.01□□□□□ -0.65
PTPN7-219ENST00000629151 CHRNGP07510 517 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 CD63P08962 238 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 CCL4P13236 92 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 MAPK10P53779 464 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 FOXC1Q12948 553 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 CSTF3Q12996 717 aaKnown RBP11.01□□□□□ -0.65
PTPN7-219ENST00000629151 HERC3Q15034 1050 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 ADPRMQ3LIE5 342 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 C3orf38Q5JPI3 329 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 SH2D4BQ5SQS7 431 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 DEPDC1Q5TB30 811 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 KANK2Q63ZY3 851 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 FRMPD2BQ6IN97 320 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 TMEM214Q6NUQ4 689 aaKnown RBP11.01□□□□□ -0.65
PTPN7-219ENST00000629151 PRMT9Q6P2P2 845 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 RPS27LQ71UM5 84 aaKnown RBP11.01□□□□□ -0.65
PTPN7-219ENST00000629151 TRIM46Q7Z4K8 759 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 VN1R4Q7Z5H5 301 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 TMEM126BQ8IUX1 230 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 PLD3Q8IV08 490 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTPN7-219ENST00000629151 OR4N4Q8N0Y3 316 aa11.01□□□□□ -0.65
PTPN7-219ENST00000629151 OR1L3Q8NH93 324 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms