RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 V9GYQ6 96 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 IQCMA0A1B0GVH7 501 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 PIPSLA2A3N6 862 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 ERI2A8K979 691 aaKnown RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 SMLR1H3BR10 107 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 H7C2Y5 167 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 GNGT2O14610 69 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 GABRDO14764 452 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 SYN3O14994 580 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 KIAA0513O60268 411 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 EIF1BO60739 113 aaKnown RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 ALDH1A1P00352 501 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 EPOP01588 193 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 CSF3P09919 207 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 SFTPCP11686 197 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 IGFBP5P24593 272 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 AZGP1P25311 298 aaKnown RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 PSMA3P25788 255 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 DCTP40126 519 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 EIF1P41567 113 aaKnown RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 CLCN5P51795 746 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 PSMD4P55036 377 aaKnown RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 RAB10P61026 200 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 HOXC5Q00444 222 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 FGL1Q08830 312 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 RPA4Q13156 261 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 VPS26BQ4G0F5 336 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 C4orf46Q504U0 113 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 ZNF789Q5FWF6 425 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 PABPC1L2AQ5JQF8 200 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 ARTNQ5T4W7 220 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 PKN3Q6P5Z2 889 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 BLOC1S3Q6QNY0 202 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 KLHL17Q6TDP4 642 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 AHSA2Q719I0 299 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 C12orf40Q86WS4 652 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 CNTN4Q8IWV2 1026 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 ARHGAP12Q8IWW6 846 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 KLHDC8BQ8IXV7 354 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 CYP4Z2PQ8N1L4 340 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 HEXDCQ8WVB3 486 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 TCEAL3Q969E4 200 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 PCED1BQ96HM7 432 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 RBP7Q96R05 134 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 RAD9AQ99638 391 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 TBL1YQ9BQ87 522 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 MARVELD1Q9BSK0 173 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 COLEC11Q9BWP8 271 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 OR51E2Q9H255 320 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 BABAM2Q9NXR7 383 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 EPHA6Q9UF33 1036 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 OR12D3Q9UGF7 316 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 LEF1Q9UJU2 399 aaPredicted RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 CMAHPQ9Y471 501 aa7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 COL4A4P53420 1690 aaPredicted RBP7.26□□□□□ -1.25
TRIM49B-202ENST00000622138 NYNRINQ9P2P1 1898 aaKnown RBP7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 MBLAC1A4D2B0 266 aaPredicted RBP7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 TRABD2BA6NFA1 517 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 PCDH17O14917 1159 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 FABP7O15540 132 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 CACNG3O60359 315 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 GREM1O60565 184 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 RECQL5O94762 991 aaPredicted RBP7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 IPO13O94829 963 aaKnown RBP7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 MT-CO1P00395 513 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 OR56A5P0C7T3 313 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 PRKAR1AP10644 381 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 POU2F1P14859 743 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 GGT1P19440 569 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 YWHAQP27348 245 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 POU1F1P28069 291 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 GPC1P35052 558 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 CSKP41240 450 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 NRIP1P48552 1158 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 CXCR3P49682 368 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 ATP12AP54707 1039 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 BTG1P62324 171 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 ALDH6A1Q02252 535 aaKnown RBP7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 CSTF1Q05048 431 aaKnown RBP7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 DUSP28Q4G0W2 176 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 FLYWCH1Q4VC44 716 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 RABL3Q5HYI8 236 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 RAB41Q5JT25 222 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 PRSS36Q5K4E3 855 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 LRRC66Q68CR7 880 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 NAPEPLDQ6IQ20 393 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 ZNF425Q6IV72 752 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 PDZD4Q76G19 769 aaPredicted RBP7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 ZNF367Q7RTV3 350 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 KDELC2Q7Z4H8 507 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 ABI1Q8IZP0 508 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 SLC37A3Q8NCC5 494 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 OR52E4Q8NGH9 312 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 SH3RF2Q8TEC5 729 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 NSMAFQ92636 917 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 HGDQ93099 445 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 TBC1D20Q96BZ9 403 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 NXPE2Q96DL1 559 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 CRELD1Q96HD1 420 aa7.25□□□□□ -1.25
TRIM49B-202ENST00000622138 TOX2Q96NM4 488 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms