RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 TSTQ16762 297 aaKnown RBP15.21■□□□□ 0.03
NPHP4-211ENST00000622020 IER5LQ5T953 404 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 NXNL2Q5VZ03 156 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 KLHL17Q6TDP4 642 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 C17orf99Q6UX52 265 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 USP43Q70EL4 1123 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 TSEN54Q7Z6J9 526 aaKnown RBP15.21■□□□□ 0.03
NPHP4-211ENST00000622020 DNAJC22Q8N4W6 341 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 C1orf52Q8N6N3 182 aaKnown RBP15.21■□□□□ 0.03
NPHP4-211ENST00000622020 CEP19Q96LK0 163 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 IL4I1Q96RQ9 567 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 HTATIP2Q9BUP3 242 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 DUSP26Q9BV47 211 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 SLC29A3Q9BZD2 475 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 CEP44Q9C0F1 390 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 AP3M1Q9Y2T2 418 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 PCDHGB6Q9Y5F9 930 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 HSPE1-MOB4S4R3N1 261 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 C5orf42Q9H799 3197 aa15.21■□□□□ 0.03
NPHP4-211ENST00000622020 E7EQ34 232 aa15.21■□□□□ 0.02
NPHP4-211ENST00000622020 KMOO15229 486 aa15.21■□□□□ 0.02
NPHP4-211ENST00000622020 PRPS1L1P21108 318 aa15.21■□□□□ 0.02
NPHP4-211ENST00000622020 RPS3P23396 243 aaKnown RBP eCLIP15.21■□□□□ 0.02
NPHP4-211ENST00000622020 EXOC3L2Q2M3D2 409 aa15.21■□□□□ 0.02
NPHP4-211ENST00000622020 FAHD1Q6P587 224 aa15.21■□□□□ 0.02
NPHP4-211ENST00000622020 ARL14EPQ8N8R7 260 aaPredicted RBP15.21■□□□□ 0.02
NPHP4-211ENST00000622020 CEP295NLQ96MC4 621 aa15.21■□□□□ 0.02
NPHP4-211ENST00000622020 NEDD4LQ96PU5 975 aa15.21■□□□□ 0.02
NPHP4-211ENST00000622020 BCL7BQ9BQE9 202 aa15.21■□□□□ 0.02
NPHP4-211ENST00000622020 KCTD5Q9NXV2 234 aa15.21■□□□□ 0.02
NPHP4-211ENST00000622020 XIRP2A4UGR9 3374 aa15.21■□□□□ 0.02
NPHP4-211ENST00000622020 LOC110117498-PIK3R3F6TDL0 507 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 MED26O95402 600 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 CDK1P06493 297 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 CKMT1AP12532 417 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 CTSOP43234 321 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-211ENST00000622020 RGS6P49758 472 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 FADDQ13158 208 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 TAB1Q15750 504 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 CCSMST1Q4G0I0 132 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 ZMAT1Q5H9K5 638 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 SPANXN2Q5MJ10 180 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 MFSD14CQ5VZR4 134 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 TXNDC8Q6A555 127 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 SLC46A3Q7Z3Q1 461 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 SLC44A2Q8IWA5 706 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-211ENST00000622020 SCAMP4Q969E2 229 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 MYDGFQ969H8 173 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 ZNF486Q96H40 463 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-211ENST00000622020 SP140LQ9H930 580 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 TRIM39Q9HCM9 518 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 ADPRHL2Q9NX46 363 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 NDUFAF4Q9P032 175 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 LYVE1Q9Y5Y7 322 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 KCNE1BA0A087WTH5 132 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 PNMA8CA0A1B0GUJ8 204 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 PCDH17O14917 1159 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 MAPK1P28482 360 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 NSG1P42857 185 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 MXD1Q05195 221 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 IQCCQ4KMZ1 466 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 CRTC1Q6UUV9 634 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 MACC1Q6ZN28 852 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 LGI4Q8N135 537 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 LILRA3Q8N6C8 439 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-211ENST00000622020 B3GNT7Q8NFL0 401 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 DBF4BQ8NFT6 615 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 CNPPD1Q9BV87 410 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 ASIC5Q9NY37 505 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 ZNF226Q9NYT6 803 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 VPS29Q9UBQ0 182 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 ERVW-1Q9UQF0 538 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 MAP4K5Q9Y4K4 846 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 PCDHB7Q9Y5E2 793 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 PCDHGB3Q9Y5G1 929 aa15.2■□□□□ 0.02
NPHP4-211ENST00000622020 TMEM189-UBE2V1I3L0A0 370 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 GCM2O75603 506 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-211ENST00000622020 KRT8P05787 483 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 ANXA4P09525 319 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-211ENST00000622020 IL1RNP18510 177 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 CRHR2Q13324 411 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 ZNF181Q2M3W8 571 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 TRIM71Q2Q1W2 868 aaKnown RBP15.19■□□□□ 0.02
NPHP4-211ENST00000622020 BCL7AQ4VC05 210 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 DGKKQ5KSL6 1271 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 KIAA1841Q6NSI8 718 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 TXNDC15Q96J42 360 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 DNAJC11Q9NVH1 559 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 KLHL3Q9UH77 587 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 TMA7Q9Y2S6 64 aaKnown RBP15.19■□□□□ 0.02
NPHP4-211ENST00000622020 IFT52Q9Y366 437 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 PLXNA3P51805 1871 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 TMEM202A6NGA9 273 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 PDZK1P1A8MUH7 402 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 SEPT4O43236 478 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 DYRK3O43781 588 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 PAX3P23760 479 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 GGT2P36268 569 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 PIK3CBP42338 1070 aa15.19■□□□□ 0.02
NPHP4-211ENST00000622020 RACK1P63244 317 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms