RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 UHRF1Q96T88 793 aaPredicted RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 DENND2DQ9H6A0 471 aaPredicted RBP8.94□□□□□ -0.98
GGA3-223ENST00000621870 METTL7AQ9H8H3 244 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 PCDHGA2Q9Y5H1 932 aa8.94□□□□□ -0.98
GGA3-223ENST00000621870 FEZF1A0PJY2 475 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 CAPN5O15484 640 aaPredicted RBP8.93□□□□□ -0.98
GGA3-223ENST00000621870 LINGO3P0C6S8 592 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 HOXD8P13378 290 aaPredicted RBP8.93□□□□□ -0.98
GGA3-223ENST00000621870 ACADLP28330 430 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 HOXD9P28356 352 aaPredicted RBP8.93□□□□□ -0.98
GGA3-223ENST00000621870 IL12RB1P42701 662 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 CDK9P50750 372 aaKnown RBP8.93□□□□□ -0.98
GGA3-223ENST00000621870 CLCN4P51793 760 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 SCARB2Q14108 478 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 PDK3Q15120 406 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 CATSPEREQ5SY80 951 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 BROXQ5VW32 411 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 AAGABQ6PD74 315 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 HSD11B1LQ7Z5J1 315 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 ASPGQ86U10 573 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 PLXDC1Q8IUK5 500 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 PHTF2Q8N3S3 785 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 OXR1Q8N573 874 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 CSNK1A1LQ8N752 337 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 OR4K14Q8NGD5 310 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 OR52B6Q8NGF0 335 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 OR6K6Q8NGW6 343 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 HCAR2Q8TDS4 363 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 DENND1AQ8TEH3 1009 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 C1GALT1C1Q96EU7 318 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 KATNBL1Q9H079 304 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 AMBNQ9NP70 447 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 PRTFDC1Q9NRG1 225 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 MTMR10Q9NXD2 777 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 IFT80Q9P2H3 777 aaPredicted RBP8.93□□□□□ -0.98
GGA3-223ENST00000621870 P2RX2Q9UBL9 471 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.93□□□□□ -0.985e-14■■■■■ 87.8
GGA3-223ENST00000621870 CA5BQ9Y2D0 317 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 WDR45Q9Y484 360 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 E7ESA3 106 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 SCDO00767 359 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 DNAJA2O60884 412 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 GPIP06744 558 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 PROS1P07225 676 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 CXCR1P25024 350 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 ITGB7P26010 798 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 KCNJ5P48544 419 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 XKP51811 444 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 CDK6Q00534 326 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 TRAF3Q13114 568 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 TARDBPQ13148 414 aaKnown RBP eCLIP8.93□□□□□ -0.98
GGA3-223ENST00000621870 DECR1Q16698 335 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 PUS10Q3MIT2 529 aaKnown RBP8.93□□□□□ -0.98
GGA3-223ENST00000621870 C6orf136Q5SQH8 315 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 UBAP2Q5T6F2 1119 aaKnown RBP8.93□□□□□ -0.98
GGA3-223ENST00000621870 LYSMD4Q5XG99 296 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 TRIQKQ629K1 86 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 TRNP1Q6NT89 227 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 SLC36A4Q6YBV0 504 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 TIFABQ6ZNK6 161 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 FRMD7Q6ZUT3 714 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 GJD3Q8N144 294 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 OR4C6Q8NH72 309 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 GIPC3Q8TF64 312 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 AURKBQ96GD4 344 aaPredicted RBP8.93□□□□□ -0.98
GGA3-223ENST00000621870 APOOQ9BUR5 198 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 DEFB126Q9BYW3 111 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 KCNN2Q9H2S1 579 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 POMPQ9Y244 141 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 SIT1Q9Y3P8 196 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 ATG2BQ96BY7 2078 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 XIRP1Q702N8 1843 aaKnown RBP8.93□□□□□ -0.98
GGA3-223ENST00000621870 DRGXA6NNA5 263 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 FAM155AB1AL88 458 aaPredicted RBP8.93□□□□□ -0.98
GGA3-223ENST00000621870 PRAMEF26H0Y7S4 382 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 TMCC2O75069 709 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 C6orf47O95873 294 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 CHRM5P08912 532 aaPredicted RBP8.93□□□□□ -0.98
GGA3-223ENST00000621870 CD1DP15813 335 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 P2RY2P41231 377 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 PER3P56645 1201 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 NOXRED1Q6NXP6 359 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 C11orf88Q6PI97 169 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 RTL10Q7L3V2 364 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 SLC22A15Q8IZD6 547 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 LRRC58Q96CX6 371 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 CHFRQ96EP1 664 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 TMEM74Q96NL1 305 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 OSBPL11Q9BXB4 747 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 PAIP1Q9H074 479 aaKnown RBP8.93□□□□□ -0.98
GGA3-223ENST00000621870 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.93□□□□□ -0.98
GGA3-223ENST00000621870 SERINC1Q9NRX5 453 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 RARRES3Q9UL19 164 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 DMTF1Q9Y222 760 aa8.93□□□□□ -0.98
GGA3-223ENST00000621870 RBM7Q9Y580 266 aaKnown RBP8.93□□□□□ -0.98
GGA3-223ENST00000621870 MGRN1O60291 552 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 CD9P21926 228 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 TNFRSF4P43489 277 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 TECRLQ5HYJ1 363 aa8.92□□□□□ -0.98
GGA3-223ENST00000621870 RSBN1Q5VWQ0 802 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms