RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 RTP2Q5QGT7 225 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 ATAD3CQ5T2N8 411 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 C19orf48Q6RUI8 117 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 ZNF783Q6ZMS7 281 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 CDC26Q8NHZ8 85 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 ELMO1Q92556 727 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 NIPSNAP1Q9BPW8 284 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 C19orf43Q9BQ61 176 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 TBC1D24Q9ULP9 559 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 ANKRD34BA5PLL1 514 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 A8MX80 341 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 ADAMDEC1O15204 470 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 ADRA2AP08913 450 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 TNFRSF1BP20333 461 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 ITPKAP23677 461 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 GKP32189 559 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 SOX6P35712 828 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 HTR3AP46098 478 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 HKDC1Q2TB90 917 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 ZNF367Q7RTV3 350 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 UBQLNLQ8IYU4 475 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 PAF1Q8N7H5 531 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 SPPL2AQ8TCT8 520 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 C17orf50Q8WW18 174 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 CCM2Q9BSQ5 444 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 CCDC32Q9BV29 185 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 SLC22A14Q9Y267 594 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 OR51B4Q9Y5P0 310 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 CFAP20Q9Y6A4 193 aaKnown RBP18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 AP1M2Q9Y6Q5 423 aa18.88■□□□□ 0.61
PDLIM3-212ENST00000620787 AGAP14A8MT82 685 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 PLK4O00444 970 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 CTDSP2O14595 271 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 CYBAP13498 195 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 NSG1P42857 185 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 C21orf58P58505 322 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 B4GALNT1Q00973 533 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 RGNQ15493 299 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 SF1Q15637 639 aaKnown RBP18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 ZNF544Q6NX49 715 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 TPGS1Q6ZTW0 290 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 B3GNT7Q8NFL0 401 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 OR5M11Q96RB7 305 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 DUSP26Q9BV47 211 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 MARCH5Q9NX47 278 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 ERVK13-1Q9NX77 482 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 SLC6A14Q9UN76 642 aa18.87■□□□□ 0.61
PDLIM3-212ENST00000620787 FAM172BPA6NC97 362 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 TBL1XO60907 577 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 HLA-EP13747 358 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 ANXA8P13928 327 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 JUPP14923 745 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 CSTF3Q12996 717 aaKnown RBP18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 CHIT1Q13231 466 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 GAB1Q13480 694 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 DOC2BQ14184 412 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 NXNL2Q5VZ03 156 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 ANKS3Q6ZW76 656 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 UTS2BQ765I0 119 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 TSPAN33Q86UF1 283 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 ATCAYQ86WG3 371 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 DEPDC4Q8N2C3 294 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 GPR26Q8NDV2 337 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 OR52J3Q8NH60 311 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 UTP15Q8TED0 518 aaKnown RBP18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 CCDC177Q9NQR7 707 aaPredicted RBP18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 DNAJC11Q9NVH1 559 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 MS4A12Q9NXJ0 267 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 KLHL42Q9P2K6 505 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 CFL2Q9Y281 166 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 PDZK1P1A8MUH7 402 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 SLC15A1P46059 708 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 SELENOWP63302 87 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 LRRC26Q2I0M4 334 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 BCL7AQ4VC05 210 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 VASH1Q7L8A9 365 aaPredicted RBP18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 LGI4Q8N135 537 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 ASB11Q8WXH4 323 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 SOCS4Q8WXH5 440 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 OR2A14Q96R47 310 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 KCNS3Q9BQ31 491 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 SLC30A2Q9BRI3 323 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 NDEL1Q9GZM8 345 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 TRAPPC4Q9Y296 219 aa18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 WBP11Q9Y2W2 641 aaKnown RBP18.86■□□□□ 0.61
PDLIM3-212ENST00000620787 SCAMP2O15127 329 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 SMAD6O43541 496 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 OPN1SWP03999 348 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 C8GP07360 202 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 CD22P20273 847 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 CSKP41240 450 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 HNMTP50135 292 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 BCL2L1Q07817 233 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 SMARCB1Q12824 385 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 TP53BP2Q13625 1128 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 TSTQ16762 297 aaKnown RBP18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 EXOC3L2Q2M3D2 409 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 VRK3Q8IV63 474 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 NAGSQ8N159 534 aa18.85■□□□□ 0.61
PDLIM3-212ENST00000620787 CBARPQ8N350 705 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms