RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PARP12Q9H0J9 701 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 METTL17Q9H7H0 456 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 KRCC1Q9NPI7 259 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 PCCBP05166 539 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 FBXO16Q8IX29 292 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 CDK20Q8IZL9 346 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 POMGNT2Q8NAT1 580 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 XAGE5Q8WWM1 108 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 AP5M1Q9H0R1 490 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 LYARQ9NX58 379 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 CROCC2H7BZ55 1655 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 F5H0A9 414 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 NR2C1P13056 603 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 RAB6AP20340 208 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 IFNGR2P38484 337 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 CCR4P51679 360 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 IFI44LQ53G44 452 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 GPRC6AQ5T6X5 926 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 APOBEC3HQ6NTF7 200 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SLC30A3Q99726 388 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 CHRDQ9H2X0 955 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 HCRTO43612 131 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 GPLD1P80108 840 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 HSPB3Q12988 150 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 RFTN1Q14699 578 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 EXOC3L2Q2M3D2 409 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 TOR2AQ5JU69 321 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 LINGO4Q6UY18 593 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 TTLL10Q6ZVT0 673 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF34Q8IZ26 560 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SLC5A8Q8N695 610 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 NFKBIDQ8NI38 313 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 DOK4Q8TEW6 326 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 KNTC1P50748 2209 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 KCNQ2O43526 872 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 AKAP8O43823 692 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 CST3P01034 146 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 GPR15P49685 360 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 DCST1Q5T197 706 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 RGMBQ6NW40 437 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 KANSL1Q7Z3B3 1105 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 LYSMD2Q8IV50 215 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 AQP12AQ8IXF9 295 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 NETO1Q8TDF5 533 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 MUL1Q969V5 352 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 IFT22Q9H7X7 185 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 WRAP73Q9P2S5 460 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 FAM234BA2RU67 622 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 MEIS3P1A6NDR6 274 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 CDK2AP1O14519 115 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 ARPC1BO15143 372 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SIGLEC5O15389 551 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 PEX10O60683 326 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 VNN1O95497 513 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 LDOC1O95751 146 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SMPD1P17405 629 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 CDH4P55283 916 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SIGLEC14Q08ET2 396 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SSX9Q7RTT3 188 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 FAM220AQ7Z4H9 259 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SYT14Q8NB59 555 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 CHDHQ8NE62 594 aaPredicted RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 OR8K5Q8NH50 307 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 HSPA12BQ96MM6 686 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 ARMC1Q9NVT9 282 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 A0A1B0GVT2 93 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SDHDO14521 159 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 LYRM1O43325 122 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 FAM189A1O60320 539 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 DARSP14868 501 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 NRIP1P48552 1158 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 MASP1P48740 699 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SNRPFP62306 86 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 LRRC73Q5JTD7 316 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 PDSS1Q5T2R2 415 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 ARHGAP11AQ6P4F7 1023 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF367Q7RTV3 350 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 UBQLNLQ8IYU4 475 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 TCEANCQ8N8B7 351 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 GDPD1Q8N9F7 314 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 CD101Q93033 1021 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 CNDP2Q96KP4 475 aaKnown RBP4.89□□□□□ -1.63
VPS13D-214ENST00000620676 PPP3R2Q96LZ3 170 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 GALPQ9UBC7 116 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 CNTN6Q9UQ52 1028 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 TRBV23-1A0A0A0MS06 115 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 PPP6CO00743 305 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 GRPRP30550 384 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 KIR3DL1P43629 444 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 PRKCDQ05655 676 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 PTGR1Q14914 329 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SV2CQ496J9 727 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 C6orf132Q5T0Z8 1188 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 FAM180BQ6P0A1 224 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SERPINA13PQ6UXR4 307 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 SERPINA12Q8IW75 414 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 REPS1Q96D71 796 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 TXNDC15Q96J42 360 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 TTLL2Q9BWV7 592 aa4.89□□□□□ -1.63
VPS13D-214ENST00000620676 BTBD2Q9BX70 525 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms