RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 SLC3A1Q07837 685 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 DNASE1L3Q13609 305 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 SLC12A1Q13621 1099 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 MFSD13AQ14CX5 517 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 HNRNPA1L2Q32P51 320 aaKnown RBP11.67□□□□□ -0.54
SRRT-216ENST00000618262 NCEH1Q6PIU2 408 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 ZNF783Q6ZMS7 281 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 PHC2Q8IXK0 858 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 CPNE9Q8IYJ1 553 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 TCP10LQ8TDR4 215 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 RTP4Q96DX8 246 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 FCRL5Q96RD9 977 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 FAM96AQ9H5X1 160 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 CPNE5Q9HCH3 593 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 GLTPQ9NZD2 209 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 IL36AQ9UHA7 158 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 CELSR3Q9NYQ7 3312 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 LOC100653049A0A140TA62 436 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 A0A1W2PPW3 197 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 CENPXA8MT69 81 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 KRT34O76011 436 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 CLDN7O95471 211 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 AP2A1O95782 977 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 EPOP01588 193 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 FCER2P06734 321 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 MLNP12872 115 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 TNNI3P19429 210 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 CR2P20023 1033 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 DDCP20711 480 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 TAP2Q03519 686 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 GALEQ14376 348 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 SLC1A5Q15758 541 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 CARTPTQ16568 116 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 MSANTD1Q6ZTZ1 278 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 NUDT18Q6ZVK8 323 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 OR13C4Q8NGS5 318 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 ART4Q93070 314 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 PTCD3Q96EY7 689 aaKnown RBP11.67□□□□□ -0.54
SRRT-216ENST00000618262 PANX3Q96QZ0 392 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 ZNF347Q96SE7 839 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 FAM129BQ96TA1 746 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 THAP10Q9P2Z0 257 aaPredicted RBP11.67□□□□□ -0.54
SRRT-216ENST00000618262 ZNF229Q9UJW7 825 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 COPS3Q9UNS2 423 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 AP4S1Q9Y587 144 aa11.67□□□□□ -0.54
SRRT-216ENST00000618262 WDFY3Q8IZQ1 3526 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 A0A1W2PQF6 199 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 SCAF4O95104 1147 aaKnown RBP11.66□□□□□ -0.54
SRRT-216ENST00000618262 RAB3DO95716 219 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 MBP02144 154 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 NTSR1P30989 418 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 SEMA5AQ13591 1074 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 PFKFB4Q16877 469 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 IGF2-ASQ6U949 168 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 GDPD4Q6W3E5 623 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 RABEPKQ7Z6M1 372 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 MOSPD2Q8NHP6 518 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 SLCO2A1Q92959 643 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 PPA2Q9H2U2 334 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 RPF2Q9H7B2 306 aaKnown RBP11.66□□□□□ -0.54
SRRT-216ENST00000618262 KCNK9Q9NPC2 374 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 EIF3KQ9UBQ5 218 aaKnown RBP11.66□□□□□ -0.54
SRRT-216ENST00000618262 NPIPB15A6NHN6 443 aaPredicted RBP11.66□□□□□ -0.54
SRRT-216ENST00000618262 ANXA9O76027 345 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 LCKP06239 509 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 PSKH1P11801 424 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 IFI30P13284 250 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 TAC1P20366 129 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 PRIM2P49643 509 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 HABP2Q14520 560 aaPredicted RBP11.66□□□□□ -0.54
SRRT-216ENST00000618262 ZBED5Q49AG3 693 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 ARMC12Q5T9G4 340 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 DENND5AQ6IQ26 1287 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 OGFOD3Q6PK18 319 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 ERMP1Q7Z2K6 904 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 LYSMD3Q7Z3D4 306 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 KIAA0907Q7Z7F0 614 aaPredicted RBP11.66□□□□□ -0.54
SRRT-216ENST00000618262 TPRA1Q86W33 373 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 PDIK1LQ8N165 341 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 TP53I13Q8NBR0 393 aaPredicted RBP11.66□□□□□ -0.54
SRRT-216ENST00000618262 ZNF420Q8TAQ5 688 aaPredicted RBP11.66□□□□□ -0.54
SRRT-216ENST00000618262 VOPP1Q96AW1 172 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 FOPNLQ96NB1 174 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 VAT1Q99536 393 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 TMEM109Q9BVC6 243 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 TRIM2Q9C040 744 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 NKIRAS2Q9NYR9 191 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 CD300AQ9UGN4 299 aa11.66□□□□□ -0.54
SRRT-216ENST00000618262 AAR2Q9Y312 384 aaKnown RBP11.66□□□□□ -0.54
SRRT-216ENST00000618262 LEUTXA8MZ59 168 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 RAB3AP20336 220 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 ATP5F1P24539 256 aaPredicted RBP11.65□□□□□ -0.54
SRRT-216ENST00000618262 NMBRP28336 390 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 SERPINA4P29622 427 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 TPMTP51580 245 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 CCR9P51686 369 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 ZNF45Q02386 682 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 CNTN1Q12860 1018 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 TMEM44Q2T9K0 475 aa11.65□□□□□ -0.54
SRRT-216ENST00000618262 TRMT10BQ6PF06 316 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms