RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ALKBH8Q96BT7 664 aaKnown RBP19.6■□□□□ 0.73
TRAPPC3-208ENST00000616074 UNKQ9C0B0 810 aaKnown RBP19.6■□□□□ 0.73
TRAPPC3-208ENST00000616074 ANKHQ9HCJ1 492 aa19.6■□□□□ 0.73
TRAPPC3-208ENST00000616074 WISP2O76076 250 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 C8GP07360 202 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 MYBL2P10244 700 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 CDH1P12830 882 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 GRNP28799 593 aaKnown RBP19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 RGS4P49798 205 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 SP140Q13342 867 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 NAE1Q13564 534 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 ZNF766Q5HY98 468 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 ACER2Q5QJU3 275 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 UGT3A1Q6NUS8 523 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 H3F3CQ6NXT2 135 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 C2CD4AQ8NCU7 369 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 SLC13A3Q8WWT9 602 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 CCDC120Q96HB5 630 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 PBKQ96KB5 322 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 ZNF354BQ96LW1 612 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 SGPP1Q9BX95 441 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 RBCK1Q9BYM8 510 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 KCNK13Q9HB14 408 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 PARVBQ9HBI1 364 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 SUCOQ9UBS9 1254 aaKnown RBP19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 SH3BGRL2Q9UJC5 107 aa19.59■□□□□ 0.73
TRAPPC3-208ENST00000616074 FBN2P35556 2912 aa19.58■□□□□ 0.73
TRAPPC3-208ENST00000616074 CCL21O00585 134 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 PGAM1P18669 254 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 GABRB3P28472 473 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 CA7P43166 264 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 AGTR2P50052 363 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 ST13P50502 369 aaKnown RBP19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 CRYMQ14894 314 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 PHKG1Q16816 387 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 RBM20Q5T481 1227 aaKnown RBP19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 CAPN13Q6MZZ7 669 aaPredicted RBP19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 PAQR3Q6TCH7 311 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 LCTLQ6UWM7 567 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 PCGF5Q86SE9 256 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 CRLF3Q8IUI8 442 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 PPIL6Q8IXY8 311 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 MYO1HQ8N1T3 1032 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 NPAS2Q99743 824 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 TAS2R13Q9NYV9 303 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 NAALAD2Q9Y3Q0 740 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 JRKLQ9Y4A0 524 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 CSMD2Q7Z408 3487 aa19.58■□□□□ 0.72
TRAPPC3-208ENST00000616074 ZNF860A6NHJ4 632 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 PGRMC1O00264 195 aaKnown RBP19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 SLC16A5O15375 505 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 CDC123O75794 336 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 SLC35G6P0C7Q6 338 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 NPPBP16860 134 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 CCND1P24385 295 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 GRK3P35626 688 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 CDKN2DP55273 166 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 RHAGQ02094 409 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 DHX9Q08211 1270 aaKnown RBP19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 ART3Q13508 389 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 TUBA3CQ13748 450 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 EXT1Q16394 746 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 ZXDCQ2QGD7 858 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 RNASEH2BQ5TBB1 312 aaKnown RBP19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 TUBA3EQ6PEY2 450 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 PAPD4Q6PIY7 484 aaKnown RBP19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 PALM2Q8IXS6 379 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 MFSD9Q8NBP5 474 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 OR5T3Q8NGG3 340 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 M1APQ8TC57 530 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 LINGO1Q96FE5 620 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 PEX11GQ96HA9 241 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 SIGLEC12Q96PQ1 595 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 ANKRD10Q9NXR5 420 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 SLC22A7Q9Y694 548 aa19.57■□□□□ 0.72
TRAPPC3-208ENST00000616074 MAN1A2O60476 641 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 BANF1O75531 89 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 MEF2AQ02078 507 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 ABRAXAS2Q15018 415 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 MEP1AQ16819 746 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 SFT2D3Q587I9 215 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 MRGPRGQ86SM5 289 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 MDS2Q8NDY4 140 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 PLPP5Q8NEB5 264 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 TSLPQ969D9 159 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 PYCR2Q96C36 320 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 NAP1L3Q99457 506 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 HES7Q9BYE0 225 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 FAM129AQ9BZQ8 928 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 MMP25Q9NPA2 562 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 LANCL2Q9NS86 450 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 PCDHGB6Q9Y5F9 930 aa19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 KLF2Q9Y5W3 355 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC3-208ENST00000616074 OTOGQ6ZRI0 2925 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 TSPAN12O95859 305 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 HIST1H2AGP0C0S8 130 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 HIST1H2ADP20671 130 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 CD96P40200 585 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 FNTAP49354 379 aa19.55■□□□□ 0.72
TRAPPC3-208ENST00000616074 RBPJQ06330 500 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms