RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 IL10RBQ08334 325 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 ABHD18Q0P651 414 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 VMACQ2NL98 169 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 BTBD16Q32M84 506 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 DUSP28Q4G0W2 176 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 LRRC73Q5JTD7 316 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 PTCHD4Q6ZW05 846 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 ADAMTSL2Q86TH1 951 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 ZNF566Q969W8 418 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 ABHD16BQ9H3Z7 469 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 CLMPQ9H6B4 373 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 UBA2Q9UBT2 640 aaPredicted RBP12.72□□□□□ -0.37
MSH6-214ENST00000616033 MKLN1Q9UL63 735 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 PCDHB5Q9Y5E4 795 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 TNPO3Q9Y5L0 923 aaKnown RBP12.72□□□□□ -0.37
MSH6-214ENST00000616033 SCN4AP35499 1836 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 CENPBD1B2RD01 187 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 RGS13O14921 159 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 ARHGEF9O43307 516 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 ESR1P03372 595 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 CDK1P06493 297 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 IGFBP1P08833 259 aaPredicted RBP12.72□□□□□ -0.37
MSH6-214ENST00000616033 OR3A3P47888 321 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 ZNF140P52738 457 aaPredicted RBP12.72□□□□□ -0.37
MSH6-214ENST00000616033 DBPQ10586 325 aaPredicted RBP12.72□□□□□ -0.37
MSH6-214ENST00000616033 TAF10Q12962 218 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 LIPKQ5VXJ0 399 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 OTOP2Q7RTS6 562 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 SERPINA9Q86WD7 417 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 ADGRG2Q8IZP9 1017 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 LGI4Q8N135 537 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 DNAJC22Q8N4W6 341 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 ZNF557Q8N988 423 aaPredicted RBP12.72□□□□□ -0.37
MSH6-214ENST00000616033 OR5AK3PQ8NH89 298 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 PHF21AQ96BD5 680 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 TCF25Q9BQ70 676 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 NUDT4Q9NZJ9 180 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 CRNNQ9UBG3 495 aaPredicted RBP12.72□□□□□ -0.37
MSH6-214ENST00000616033 PSORS1C1Q9UIG5 152 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 TMEM88BA6NKF7 163 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 FAM220BPB1ANY3 271 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 PSIP1O75475 530 aaKnown RBP12.72□□□□□ -0.37
MSH6-214ENST00000616033 GPX5O75715 221 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 CDRT1O95170 752 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 C9P02748 559 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 IL7P13232 177 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 HOXB8P17481 243 aaPredicted RBP12.72□□□□□ -0.37
MSH6-214ENST00000616033 ATN1P54259 1190 aaPredicted RBP12.72□□□□□ -0.37
MSH6-214ENST00000616033 CCL14Q16627 93 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 DGKKQ5KSL6 1271 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 ATG9BQ674R7 924 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 PAQR6Q6TCH4 344 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 PLEKHM3Q6ZWE6 761 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 TAGAPQ8N103 731 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 PTPN18Q99952 460 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 ACBD6Q9BR61 282 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 ZNF556Q9HAH1 456 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 CSNK1G1Q9HCP0 422 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 SLC35C2Q9NQQ7 365 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 COMMD3Q9UBI1 195 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 PDCD11Q14690 1871 aaKnown RBP12.72□□□□□ -0.37
MSH6-214ENST00000616033 PLXNA1Q9UIW2 1896 aa12.72□□□□□ -0.37
MSH6-214ENST00000616033 SMIM35A0A1B0GVV1 85 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 H3BN98 237 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 SLC28A1O00337 649 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 TPST2O60704 377 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 IGLV3-25P01717 112 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 KRT6AP02538 564 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 KRT6BP04259 564 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 YES1P07947 543 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 MYL9P24844 172 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 RFX2P48378 723 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 RGS4P49798 205 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 PRKCDQ05655 676 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 BOP1Q14137 746 aaKnown RBP12.71□□□□□ -0.37
MSH6-214ENST00000616033 GPR142Q7Z601 462 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 TLK2Q86UE8 772 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 CRISPLD1Q9H336 500 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 SERHLQ9NQF3 203 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 TMEM248Q9NWD8 314 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 DNMT3LQ9UJW3 386 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 FZD4Q9ULV1 537 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 ZFP37Q9Y6Q3 630 aaPredicted RBP12.71□□□□□ -0.37
MSH6-214ENST00000616033 MAGEB17A8MXT2 336 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 INSIG1O15503 277 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 SH3BP5O60239 455 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 STK16O75716 305 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 ARHGEF15O94989 841 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 PRAMEF1O95521 474 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 ADRA2AP08913 450 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 SDC1P18827 310 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 OR1G1P47890 313 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 INPP1P49441 399 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 FADDQ13158 208 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 MAD2L1Q13257 205 aaPredicted RBP12.71□□□□□ -0.37
MSH6-214ENST00000616033 COL9A2Q14055 689 aaPredicted RBP12.71□□□□□ -0.37
MSH6-214ENST00000616033 DOC2BQ14184 412 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 NFE2Q16621 373 aaPredicted RBP12.71□□□□□ -0.37
MSH6-214ENST00000616033 UPP1Q16831 310 aa12.71□□□□□ -0.37
MSH6-214ENST00000616033 EXOC3L2Q2M3D2 409 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms