RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 SLC16A5O15375 505 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 UGT2B11O75310 529 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CXCL10P02778 98 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 PRG2P13727 222 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 HOXB6P17509 224 aaKnown RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 PRKACGP22612 351 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 RPL34P49207 117 aaKnown RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CCT3P49368 545 aaKnown RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 GALK1P51570 392 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 TRAF3Q13114 568 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CHRDL2Q6WN34 429 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 B3GNT6Q6ZMB0 384 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 ZNF761Q86XN6 746 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CNTN4Q8IWV2 1026 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 SLC15A3Q8IY34 581 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 LMNTD1Q8N9Z9 388 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 RPLP0P6Q8NHW5 317 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 NFKBIDQ8NI38 313 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 TMBIM1Q969X1 311 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 L3HYPDHQ96EM0 354 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 SLC2A4RGQ9NR83 387 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 GPN3Q9UHW5 284 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CABIN1Q9Y6J0 2220 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 SMIM31A0A1B0GVY4 71 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 TMEM150CB9EJG8 249 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 E7EQ34 232 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 IL3P08700 152 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 TFPIP10646 304 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 ITGB7P26010 798 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 PDHA2P29803 388 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 SHMT2P34897 504 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 DEFB134Q4QY38 66 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 TMEM31Q5JXX7 168 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 SWT1Q5T5J6 900 aaKnown RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CCSAPQ6IQ19 270 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 NEK5Q6P3R8 708 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 ABHD13Q7L211 337 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 SPNS2Q8IVW8 549 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CCDC103Q8IW40 242 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CCDC116Q8IYX3 515 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 OXR1Q8N573 874 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 DOK4Q8TEW6 326 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 RASSF5Q8WWW0 418 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 RLN3Q8WXF3 142 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 MYEOVQ96EZ4 313 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 ZNF570Q96NI8 536 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 WBP1LQ9NX94 342 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 STOX2Q9P2F5 926 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 HS3ST2Q9Y278 367 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 DPPA5A6NC42 116 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 OR6C74A6NCV1 312 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 MROH6A6NGR9 719 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 KPNA4O00629 521 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CDC123O75794 336 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 RSL1D1O76021 490 aaKnown RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CCNB2O95067 398 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 SEMA4FO95754 770 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 NR2F6P10588 404 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 JUNDP17535 347 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 MLLT3P42568 568 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 IL12RB1P42701 662 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 ATP1A4Q13733 1029 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 DGUOKQ16854 277 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 TIMM50Q3ZCQ8 353 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CYP27C1Q4G0S4 372 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CATSPEREQ5SY80 951 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 ZFAND4Q86XD8 727 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 RNF130Q86XS8 419 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 GPR65Q8IYL9 337 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 METTL27Q8N6F8 245 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-218ENST00000610726 ART5Q96L15 291 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 TPK1Q9H3S4 243 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 REEP4Q9H6H4 257 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 C11orf16Q9NQ32 467 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 CALML5Q9NZT1 146 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 ADAMTS6Q9UKP5 1117 aa7.03□□□□□ -1.28
CSDE1-218ENST00000610726 EFCAB10A6NFE3 127 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 CAPN5O15484 640 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 CD9P21926 228 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 RPS3P23396 243 aaKnown RBP eCLIP7.02□□□□□ -1.292e-6■■□□□ 11.8
CSDE1-218ENST00000610726 TALDO1P37837 337 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 KHKP50053 298 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 MRPS15P82914 257 aaKnown RBP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 TARDBPQ13148 414 aaKnown RBP eCLIP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 SLC44A4Q53GD3 710 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 MANEALQ5VSG8 457 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 BLOC1S3Q6QNY0 202 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 SMARCD3Q6STE5 483 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 SLC9B2Q86UD5 537 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 FAM98AQ8NCA5 519 aaKnown RBP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 OLIG1Q8TAK6 271 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 MCCC1Q96RQ3 725 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 ATOH8Q96SQ7 321 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 KCNK13Q9HB14 408 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 PNO1Q9NRX1 252 aaKnown RBP7.02□□□□□ -1.29
CSDE1-218ENST00000610726 RHBDL2Q9NX52 303 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 ATXN10Q9UBB4 475 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 CD207Q9UJ71 328 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 CLCA3PQ9Y6N3 262 aa7.02□□□□□ -1.29
CSDE1-218ENST00000610726 TRBC2A0A5B9 178 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms