RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 RNF186Q9NXI6 227 aa3.76□□□□□ -1.81
SMCHD1-213ENST00000609587 IL36AQ9UHA7 158 aa3.76□□□□□ -1.81
SMCHD1-213ENST00000609587 LEF1Q9UJU2 399 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-213ENST00000609587 LIPT1Q9Y234 373 aa3.76□□□□□ -1.81
SMCHD1-213ENST00000609587 PYGO1Q9Y3Y4 419 aa3.76□□□□□ -1.81
SMCHD1-213ENST00000609587 ILVBLA1L0T0 632 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 MEIOCA2RUB1 952 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 E5RGE8 158 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 SLC33A1O00400 549 aaPredicted RBP3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 IGHDP01880 384 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 YES1P07947 543 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 SP9P0CG40 484 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 RPL35AP18077 110 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 ITIH1P19827 911 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 ELAVL4P26378 380 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 PIK3R1P27986 724 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 LEPRP48357 1165 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 CLK1P49759 484 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 CRIP2P52943 208 aaPredicted RBP3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 PAX9P55771 341 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 CLDN17P56750 224 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 SGSM1Q2NKQ1 1148 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 IQCCQ4KMZ1 466 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 ADAMTSL4-AS1Q5T5F5 129 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 OR4C11Q6IEV9 310 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 LEKR1Q6ZMV7 388 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 NOTCH2NLQ7Z3S9 236 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 ANKRD46Q86W74 232 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 GPC2Q8N158 579 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 NUP93Q8N1F7 819 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 DCLK2Q8N568 766 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 SMAP2Q8WU79 429 aaPredicted RBP3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 ZNRF4Q8WWF5 429 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 RSPH1Q8WYR4 309 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 TEKT1Q969V4 418 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 TSSK2Q96PF2 358 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 PI4K2AQ9BTU6 479 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 FUT8Q9BYC5 575 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 UBQLN3Q9H347 655 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 MMADHCQ9H3L0 296 aaPredicted RBP3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 FGF22Q9HCT0 170 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 IARS2Q9NSE4 1012 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 TBC1D13Q9NVG8 400 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 TMEM161AQ9NX61 479 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 SLCO1C1Q9NYB5 712 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 NOCTQ9UK39 431 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 ELF5Q9UKW6 265 aaPredicted RBP3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 AGTPBP1Q9UPW5 1226 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 PA2G4Q9UQ80 394 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 NSG2Q9Y328 171 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 HBS1LQ9Y450 684 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 WDR81Q562E7 1941 aa3.75□□□□□ -1.81
SMCHD1-213ENST00000609587 A0A0B4J203 849 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 TRBV4-1A0A0J9YWV2 114 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 SDR42E2A6NKP2 422 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 H3BMM5 538 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 NR5A2O00482 541 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 ZNF263O14978 683 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 IGLV1-44P01699 117 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 DLATP10515 647 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 EEF2P13639 858 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 ZNF26P17031 533 aaPredicted RBP3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 CYP2A7P20853 494 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 FRKP42685 505 aaPredicted RBP3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 DCDC1P59894 354 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 ST8SIA6P61647 398 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 CETN1Q12798 172 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 TMEM132DQ14C87 1099 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 MRGPRG-AS1Q2M3A8 158 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 ZFP69Q49AA0 526 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 ZNF542PQ5EBM4 170 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 FGD3Q5JSP0 725 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 PODNL1Q6PEZ8 512 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 CCDC91Q7Z6B0 441 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 CCDC170Q8IYT3 715 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 AMER3Q8N944 861 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 KIAA0895Q8NCT3 520 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 ZNF248Q8NDW4 579 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 OR6S1Q8NH40 331 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 MAPK15Q8TD08 544 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 GATAD1Q8WUU5 269 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 CKAP2Q8WWK9 683 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 ATG101Q9BSB4 218 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 ALKBH7Q9BT30 221 aaPredicted RBP3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 NACAP1Q9BZK3 213 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 SRD5A3Q9H8P0 318 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 RPF1Q9H9Y2 349 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 PLCXD1Q9NUJ7 323 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 DNAJC17Q9NVM6 304 aaKnown RBP3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 FBXL5Q9UKA1 691 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 GPR132Q9UNW8 380 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 ANGPTL3Q9Y5C1 460 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 COLEC10Q9Y6Z7 277 aa3.74□□□□□ -1.81
SMCHD1-213ENST00000609587 MTMR11A4FU01 709 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 ZG16O60844 167 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 RAD51DO75771 328 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 GH1P01241 217 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 C8orf89P0DMQ9 161 aa3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 RBMS1P29558 406 aaKnown RBP3.73□□□□□ -1.81
SMCHD1-213ENST00000609587 IER3P46695 156 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms