RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 FLRT2O43155 660 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 SSX4O60224 188 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 KIF5CO60282 957 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 ERLIN1O75477 346 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 KIAA0754O94854 1291 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 NFATC1O95644 943 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 TTLL1O95922 423 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 ZNF853P0CG23 659 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 UNGP13051 313 aaPredicted RBP3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 NDUFB7P17568 137 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 HRH2P25021 359 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 PTPN6P29350 595 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 PKLRP30613 574 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 IER3P46695 156 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 GYG1P46976 350 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 CDX1P47902 265 aaPredicted RBP3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 SLC6A12P48065 614 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 PLCD1P51178 756 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 MTTPP55157 894 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 GABPB1Q06547 395 aaPredicted RBP3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 DMTNQ08495 405 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 MVPQ14764 893 aaKnown RBP3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 MEP1AQ16819 746 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 KCTD21Q4G0X4 260 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 TCTE1Q5JU00 501 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 PRAMEF7Q5VXH5 474 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 AAGABQ6PD74 315 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 ANGPTL8Q6UXH0 198 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 LRIG3Q6UXM1 1119 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 ZNF517Q6ZMY9 492 aaPredicted RBP3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 TAS2R42Q7RTR8 314 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 RNF148Q8N7C7 305 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 ZNF611Q8N823 705 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 ARL14EPQ8N8R7 260 aaPredicted RBP3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 CCDC148Q8NFR7 591 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 STEAP2Q8NFT2 490 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 ACTRT2Q8TDY3 377 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 LPAR1Q92633 364 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 MOB3AQ96BX8 217 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 CFAP36Q96G28 342 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 PCDHB18PQ96TA0 734 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 DDX50Q9BQ39 737 aaKnown RBP3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 RPAP3Q9H6T3 665 aaPredicted RBP3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 TCP11L1Q9NUJ3 509 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 PANK4Q9NVE7 773 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 SLC9A2Q9UBY0 812 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 CHRNA9Q9UGM1 479 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 ACSL5Q9ULC5 683 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 ENTPD4Q9Y227 616 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 PADI2Q9Y2J8 665 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 PLXNA1Q9UIW2 1896 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 PHIPQ8WWQ0 1821 aa3.72□□□□□ -1.81
IGHV3-29-201ENST00000604817 IL16Q14005 1332 aa3.71□□□□□ -1.81
IGHV3-29-201ENST00000604817 CACNA1FO60840 1977 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 ARPC4-TTLL3A0A0A6YYG9 625 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 A0A1W2PPK0 400 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 FAM149AA5PLN7 773 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 J3QR06 171 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 SMIM22K7EJ46 135 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 MEIS2O14770 477 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 MAGEB2O15479 319 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 TSPAN1O60635 241 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 FRAT2O75474 233 aaPredicted RBP3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 SURF6O75683 361 aaKnown RBP3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 ESRRBO95718 433 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 TOP3BO95985 862 aaKnown RBP3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 OR2T7P0C7T2 308 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 EPB41P11171 864 aaKnown RBP3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 ST6GAL1P15907 406 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 MAOAP21397 527 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 DRD5P21918 477 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 BMP5P22003 454 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 CHATP28329 748 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 PRDX6P30041 224 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 HOXA7P31268 230 aaPredicted RBP3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 OTX2P32243 289 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 CCR1P32246 355 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 GRIA3P42263 894 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 ARHGAP25P42331 645 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 NPBWR1P48145 328 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 MAPK12P53778 367 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 MTCP1P56278 107 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 GSDMDP57764 484 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 TNFRSF17Q02223 184 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 MECOMQ03112 1051 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 COL10A1Q03692 680 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 TCP10Q12799 353 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 PPP1R8Q12972 351 aaKnown RBP3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 CCDC57Q2TAC2 916 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 FILIP1LQ4L180 1135 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 LACTB2Q53H82 288 aaPredicted RBP3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 AARS2Q5JTZ9 985 aaKnown RBP3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 GCNT6Q5T4J0 391 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 MFSD14CQ5VZR4 134 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 ALS2CLQ60I27 953 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 CDC42EP5Q6NZY7 148 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 TMEM65Q6PI78 240 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 BTNL8Q6UX41 500 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 ZNF534Q76KX8 674 aa3.71□□□□□ -1.82
IGHV3-29-201ENST00000604817 PHLDB2Q86SQ0 1253 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms