RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 WDR88Q6ZMY6 472 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 KCTD8Q6ZWB6 473 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 CPEB2Q7Z5Q1 589 aaKnown RBP3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 STHQ8IWL8 128 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 RCOR2Q8IZ40 523 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 THEM5Q8N1Q8 247 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 FBXW8Q8N3Y1 598 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 TMEM99Q8N816 258 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 LMNTD1Q8N9Z9 388 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 OR4A16Q8NH70 328 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 CCDC110Q8TBZ0 833 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 SMG7Q92540 1137 aaKnown RBP3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 HAS2Q92819 552 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 ULK4Q96C45 1275 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 LGALS12Q96DT0 336 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 RTP4Q96DX8 246 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 SPAG8Q99932 426 aaPredicted RBP3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 NTPCRQ9BSD7 190 aaKnown RBP3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 RNF121Q9H920 327 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 PPANQ9NQ55 473 aaKnown RBP3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 SLC12A6Q9UHW9 1150 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 SH3GLB1Q9Y371 365 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 TMED7Q9Y3B3 224 aa3.79□□□□□ -1.8
AC004542.1-201ENST00000602955 TRBV5-5A0A0J9YX44 114 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 ATP6V0E1O15342 81 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 PSMD3O43242 534 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 ATP6V1G1O75348 118 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 GRAP2O75791 330 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 OAZ2O95190 189 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 STBD1O95210 358 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 PTBP3O95758 552 aaKnown RBP3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 IFNB1P01574 187 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 KRT5P13647 590 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 CYP3A5P20815 502 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 SCP2P22307 547 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 DNAJB1P25685 340 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 ALDH4A1P30038 563 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 ALDH1B1P30837 517 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 CETN2P41208 172 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 NSFP46459 744 aaKnown RBP3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 FMO5P49326 533 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 PDLIM4P50479 330 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 CLCN4P51793 760 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 NR0B1P51843 470 aaKnown RBP3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 CLDN17P56750 224 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 LTBQ06643 244 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 DMP1Q13316 513 aaPredicted RBP3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 KARSQ15046 597 aaKnown RBP3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 TAF13Q15543 124 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 WSCD2Q2TBF2 565 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 FASTKD1Q53R41 847 aaKnown RBP3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 ZNF542PQ5EBM4 170 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 UNQ6126/PRO20091Q6UXV3 157 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 C9orf47Q6ZRZ4 202 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 TUBA1AQ71U36 451 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 SLC16A9Q7RTY1 509 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 DNAJC22Q8N4W6 341 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 LRTM2Q8N967 370 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 ZNF540Q8NDQ6 660 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 SLC24A4Q8NFF2 622 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 CHURC1Q8WUH1 139 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 SORCS1Q8WY21 1168 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 PIK3R3Q92569 461 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 C4orf45Q96LM5 186 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 GUCD1Q96NT3 240 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 BTBD9Q96Q07 612 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 CDCA3Q99618 268 aaPredicted RBP3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 TUBA1CQ9BQE3 449 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 CPVLQ9H3G5 476 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 RPF1Q9H9Y2 349 aaKnown RBP3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 NGBQ9NPG2 151 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 SOHLH2Q9NX45 425 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 IL36AQ9UHA7 158 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 MAN1B1Q9UKM7 699 aa3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 COL3A1P02461 1466 aaPredicted RBP3.78□□□□□ -1.8
AC004542.1-201ENST00000602955 SAA2-SAA4A0A096LPE2 208 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 E5RGE8 158 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 H3BMM5 538 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 PRKNO60260 465 aaPredicted RBP3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 CLN5O75503 358 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 AKR7A3O95154 331 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 TNFSF10P50591 281 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 HMGA2P52926 109 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 IRX4P78413 519 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 CEBPEQ15744 281 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 STX1AQ16623 288 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 HERC4Q5GLZ8 1057 aaPredicted RBP3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 UGT3A1Q6NUS8 523 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 OLFM4Q6UX06 510 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 MACC1Q6ZN28 852 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 ANO5Q75V66 913 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 COX8CQ7Z4L0 72 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 C1QL2Q7Z5L3 287 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 SYVN1Q86TM6 617 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 SMYD1Q8NB12 490 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 OR13C3Q8NGS6 347 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 NSL1Q96IY1 281 aa3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 ZNF48Q96MX3 618 aaPredicted RBP3.77□□□□□ -1.81
AC004542.1-201ENST00000602955 LRRC2Q9BYS8 371 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms