RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 L3HYPDHQ96EM0 354 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 NAF1Q96HR8 494 aaKnown RBP13.23□□□□□ -0.29
RNF40-212ENST00000602784 PKNOX2Q96KN3 472 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 CCNL2Q96S94 520 aaPredicted RBP13.23□□□□□ -0.29
RNF40-212ENST00000602784 GPR87Q9BY21 358 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 IQCGQ9H095 443 aaKnown RBP13.23□□□□□ -0.29
RNF40-212ENST00000602784 STMN4Q9H169 189 aaPredicted RBP13.23□□□□□ -0.29
RNF40-212ENST00000602784 SPNS1Q9H2V7 528 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 RHBGQ9H310 441 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 IPPKQ9H8X2 491 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 SSU72Q9NP77 194 aaKnown RBP13.23□□□□□ -0.29
RNF40-212ENST00000602784 DHCR7Q9UBM7 475 aaKnown RBP13.23□□□□□ -0.29
RNF40-212ENST00000602784 MID2Q9UJV3 735 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 TSC22D4Q9Y3Q8 395 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 PCDHGA6Q9Y5G7 932 aa13.23□□□□□ -0.29
RNF40-212ENST00000602784 SRRM3A6NNA2 597 aaPredicted RBP13.22□□□□□ -0.29
RNF40-212ENST00000602784 TERTO14746 1132 aaKnown RBP13.22□□□□□ -0.29
RNF40-212ENST00000602784 P2RX6O15547 441 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 TYROBPO43914 113 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 SERPINA6P08185 405 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 CD63P08962 238 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 RAB40ALP0C0E4 278 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 MYZAPP0CAP1 466 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 PIM1P11309 404 aaPredicted RBP13.22□□□□□ -0.29
RNF40-212ENST00000602784 CPA3P15088 417 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 CD22P20273 847 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 ALAS2P22557 587 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 SERPINB1P30740 379 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 UCNP55089 124 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 DNAJB13P59910 316 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 TLE3Q04726 772 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 RGS1Q08116 209 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 RBBP5Q15291 538 aaKnown RBP13.22□□□□□ -0.29
RNF40-212ENST00000602784 NDUFA9Q16795 377 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 HKDC1Q2TB90 917 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 NKAIN1Q4KMZ8 207 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 ZNF678Q5SXM1 525 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 BROXQ5VW32 411 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 GRHL2Q6ISB3 625 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 TMEM214Q6NUQ4 689 aaKnown RBP13.22□□□□□ -0.29
RNF40-212ENST00000602784 TTLL10Q6ZVT0 673 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 ANKRD53Q8N9V6 530 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 L3MBTL4Q8NA19 623 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 MR1Q95460 341 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 MAGEB10Q96LZ2 347 aaPredicted RBP13.22□□□□□ -0.29
RNF40-212ENST00000602784 C10orf90Q96M02 699 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 DCBLD2Q96PD2 775 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 NTMT1Q9BV86 223 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 AKIRIN1Q9H9L7 192 aaPredicted RBP13.22□□□□□ -0.29
RNF40-212ENST00000602784 GPN2Q9H9Y4 310 aaPredicted RBP13.22□□□□□ -0.29
RNF40-212ENST00000602784 KCND3Q9UK17 655 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 ZNF490Q9ULM2 529 aaPredicted RBP13.22□□□□□ -0.29
RNF40-212ENST00000602784 CDC14AQ9UNH5 594 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 SLC22A7Q9Y694 548 aa13.22□□□□□ -0.29
RNF40-212ENST00000602784 LOC101059948A0A1B0GTJ6 334 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 GOLGA6L10A6NI86 522 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 CLEC3AO75596 197 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 MED26O95402 600 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 CLDN9O95484 217 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 RECKO95980 971 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 OTCP00480 354 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 CAPN1P07384 714 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 TCN2P20062 427 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 HPDP32754 393 aaPredicted RBP13.21□□□□□ -0.29
RNF40-212ENST00000602784 CCNG1P51959 295 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 C10orf62Q5T681 223 aaPredicted RBP13.21□□□□□ -0.29
RNF40-212ENST00000602784 NIPAL1Q6NVV3 410 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 MED27Q6P2C8 311 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 HDXQ7Z353 690 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 EXOC3L1Q86VI1 746 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 LAS2Q8IYD9 372 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 CREB3L4Q8TEY5 395 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 CT55Q8WUE5 264 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 RUFY1Q96T51 708 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 SLC6A16Q9GZN6 736 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 DRC3Q9H069 523 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 CHST8Q9H2A9 424 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 CENPHQ9H3R5 247 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 NOL11Q9H8H0 719 aaKnown RBP13.21□□□□□ -0.29
RNF40-212ENST00000602784 ACTR8Q9H981 624 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 VIPAS39Q9H9C1 493 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 ZBTB26Q9HCK0 441 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 OXSMQ9NWU1 459 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 ADGRE2Q9UHX3 823 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 CROTQ9UKG9 612 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 PCDHGA11Q9Y5H2 935 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 ZZEF1O43149 2961 aa13.21□□□□□ -0.29
RNF40-212ENST00000602784 PKD1L2Q7Z442 2459 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 URADA6NGE7 173 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 ANKDD1BA6NHY2 528 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 C9J4A7 227 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 H0YIV9 168 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 OR7A17O14581 309 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 PRPF4O43172 522 aaKnown RBP eCLIP13.2□□□□□ -0.3
RNF40-212ENST00000602784 NDUFS4O43181 175 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 SPAG7O75391 227 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 ALBP02768 609 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 LIFP15018 202 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 CREB1P16220 341 aa13.2□□□□□ -0.3
RNF40-212ENST00000602784 ITGAXP20702 1163 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms