RNA–Protein interactions for RNA: ENST00000602253.5

ZNF546-209, Transcript of zinc finger protein 546, humanhuman

TSL 3

Gene ZNF546, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-209ENST00000602253 TMX3Q96JJ7 454 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 SMC6Q96SB8 1091 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 NPAS2Q99743 824 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 TSG101Q99816 390 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 CDADC1Q9BWV3 514 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 TGIF2Q9GZN2 237 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 CDCP1Q9H5V8 836 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 ASB8Q9H765 288 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 MVB12BQ9H7P6 319 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 PCDH9Q9HC56 1237 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 NLRC4Q9NPP4 1024 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 ERVK13-1Q9NX77 482 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 TMPRSS11EQ9UL52 423 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 CDC14AQ9UNH5 594 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 PCDHGB3Q9Y5G1 929 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 KIAA1549Q9HCM3 1950 aa3.92□□□□□ -1.78
ZNF546-209ENST00000602253 GRID2IPA4D2P6 1211 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 OR2AG2A6NM03 316 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 EEF2KO00418 725 aaKnown RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 NDC80O14777 642 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 PRPF4O43172 522 aaKnown RBP eCLIP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 GPRIN2O60269 458 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 SUSD5O60279 629 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 LMX1BO60663 402 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 MAFKO60675 156 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 SEC24DO94855 1032 aaPredicted RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 ZNF205O95201 554 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 EPPINO95925 133 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 IGHG3P01860 377 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 POLBP06746 335 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 C8orf89P0DMQ9 161 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 ZSCAN22P10073 491 aaPredicted RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 IMPDH2P12268 514 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 ERCC2P18074 760 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 FBLP22087 321 aaKnown RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 MCM3P25205 808 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 SHMT2P34897 504 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 TIMP3P35625 211 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 CYLC1P35663 651 aaPredicted RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 PRCPP42785 496 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 MMP13P45452 471 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 CD151P48509 253 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 HLCSP50747 726 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 NR0B1P51843 470 aaKnown RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 PMS1P54277 932 aaKnown RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 CDH6P55285 790 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 LINC00310P59036 64 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 PPIAP62937 165 aaKnown RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 BECN1Q14457 450 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 LONRF2Q1L5Z9 754 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 CCDC38Q502W7 563 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 C2CD6Q53TS8 623 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 WASHC2DQ5SRD0 308 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 LDLRAP1Q5SW96 308 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 ABHD17CQ6PCB6 329 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 FIGLAQ6QHK4 219 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 UNC5AQ6ZN44 842 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 DAAM2Q86T65 1068 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 CAND1Q86VP6 1230 aaKnown RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 LSRQ86X29 649 aaPredicted RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 CFAP206Q8IYR0 622 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 METTL27Q8N6F8 245 aaPredicted RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 LPCAT1Q8NF37 534 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 OR52E1Q8NGJ3 308 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 FLVCR1-AS1Q8TAF5 88 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 DTX3LQ8TDB6 740 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 KIAA1191Q96A73 305 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 SARAFQ96BY9 339 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 RMDN2Q96LZ7 410 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 ZNF285Q96NJ3 590 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 CYTH2Q99418 400 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 TDRD1Q9BXT4 1180 aaKnown RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 ADGRE3Q9BY15 652 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 POLR1EQ9GZS1 481 aaKnown RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 SCAND2PQ9GZW5 306 aaPredicted RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 XKR8Q9H6D3 395 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 ZDHHC11Q9H8X9 412 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 MAGEE1Q9HCI5 957 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 GCM1Q9NP62 436 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 MMP25Q9NPA2 562 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 NT5MQ9NPB1 228 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 MKKSQ9NPJ1 570 aaPredicted RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 AP5S1Q9NUS5 200 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 PSD3Q9NYI0 1048 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 OR6C2Q9NZP2 312 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 JKAMPQ9P055 326 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 TRPC4Q9UBN4 977 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 C19orf25Q9UFG5 118 aaPredicted RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 WBP11Q9Y2W2 641 aaKnown RBP3.91□□□□□ -1.78
ZNF546-209ENST00000602253 ATP6V1DQ9Y5K8 247 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 NFS1Q9Y697 457 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 TRRAPQ9Y4A5 3859 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 DOCK7Q96N67 2140 aa3.91□□□□□ -1.78
ZNF546-209ENST00000602253 PRKDCP78527 4128 aaKnown RBP3.9□□□□□ -1.78
ZNF546-209ENST00000602253 TMEM89A2RUT3 159 aa3.9□□□□□ -1.79
ZNF546-209ENST00000602253 AHRRA9YTQ3 701 aa3.9□□□□□ -1.79
ZNF546-209ENST00000602253 ISM1B1AKI9 464 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms