RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 PCDHGA3Q9Y5H0 932 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 CBSLP0DN79 551 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 AOAHP28039 575 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 CBSP35520 551 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 IRF8Q02556 426 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 CDH18Q13634 790 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 MLIPQ5VWP3 458 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 ZNF544Q6NX49 715 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 PIK3R3Q92569 461 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 WBP2Q969T9 261 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 HHIPQ96QV1 700 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 COPS8Q99627 209 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 CCM2Q9BSQ5 444 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 CWH43Q9H720 699 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 EXOSC4Q9NPD3 245 aaKnown RBP16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 DNAJC11Q9NVH1 559 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 NDUFAF4Q9P032 175 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 VPS29Q9UBQ0 182 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 PADI2Q9Y2J8 665 aa16.78■□□□□ 0.28
ARHGEF1-213ENST00000595897 PIKFYVEQ9Y2I7 2098 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 YY2O15391 372 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 PCSK2P16519 638 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 CRATP43155 626 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 CRYBA2P53672 197 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 KCNA10Q16322 511 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 TSPAN33Q86UF1 283 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 LGI4Q8N135 537 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 L3MBTL4Q8NA19 623 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 C11orf65Q8NCR3 313 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 OR8J2Q8NGG1 315 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 NIPSNAP1Q9BPW8 284 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 SLC30A2Q9BRI3 323 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 POFUT2Q9Y2G5 429 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 A0A1W2PQ67 120 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 CYP7B1O75881 506 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 ANXA8P13928 327 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 TSTQ16762 297 aaKnown RBP16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 TIMM50Q3ZCQ8 353 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 PRSS55Q6UWB4 352 aaPredicted RBP16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 B3GNT7Q8NFL0 401 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 C17orf50Q8WW18 174 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 SOCS4Q8WXH5 440 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 FBXL12Q9NXK8 326 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 ZNF226Q9NYT6 803 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 OGDHLQ9ULD0 1010 aa16.77■□□□□ 0.28
ARHGEF1-213ENST00000595897 PRMT3O60678 531 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 PRAMEF4O60810 478 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 SNX4O95219 450 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 CSKP41240 450 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 RGNQ15493 299 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 TAF12Q16514 161 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 CPTPQ5TA50 214 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 PRAMEF9Q5VWM5 478 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 TTC23LQ6PF05 361 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 NAGSQ8N159 534 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 DENND6BQ8NEG7 585 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 CRELD1Q96HD1 420 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 OR5M11Q96RB7 305 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 MGLLQ99685 303 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 SLC12A9Q9BXP2 914 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 OR2B2Q9GZK3 357 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 FKBP14Q9NWM8 211 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 SH3BP4Q9P0V3 963 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 KLK4Q9Y5K2 254 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 N6AMT1Q9Y5N5 214 aa16.77■□□□□ 0.27
ARHGEF1-213ENST00000595897 RGS13O14921 159 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 SMAD6O43541 496 aaKnown RBP16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 DPM1O60762 260 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 HNMTP50135 292 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 BCL7AQ4VC05 210 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 CDKL4Q5MAI5 379 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 TMC5Q6UXY8 1006 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 TPGS1Q6ZTW0 290 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 GPR26Q8NDV2 337 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 FAM8A1Q9UBU6 413 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 LINC00854A0A1B0GVQ3 168 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 BNIP3LO60238 219 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 PCDH7O60245 1069 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 SELENOWP63302 87 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 EXOC3L2Q2M3D2 409 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 CYP27C1Q4G0S4 372 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 XKR6Q5GH73 641 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 ATAD3CQ5T2N8 411 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 SLX4IPQ5VYV7 408 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 FUT10Q6P4F1 479 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 NRARPQ7Z6K4 114 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 RAVER1Q8IY67 606 aaKnown RBP16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 LILRB4Q8NHJ6 448 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 GTPBP3Q969Y2 492 aaKnown RBP16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 TRPM7Q96QT4 1865 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 RAD9AQ99638 391 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 P2RY13Q9BPV8 354 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 TTLL2Q9BWV7 592 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 RNF38Q9H0F5 515 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 HCSTQ9UBK5 93 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 PCDHGA2Q9Y5H1 932 aa16.76■□□□□ 0.27
ARHGEF1-213ENST00000595897 E9PQ18 207 aa16.75■□□□□ 0.27
ARHGEF1-213ENST00000595897 CA12O43570 354 aa16.75■□□□□ 0.27
ARHGEF1-213ENST00000595897 C8GP07360 202 aa16.75■□□□□ 0.27
ARHGEF1-213ENST00000595897 JUPP14923 745 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms