RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 KLHL41O60662 606 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 NDUFS3O75489 264 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 IPO13O94829 963 aaKnown RBP12.32□□□□□ -0.44
SCAF1-202ENST00000595242 KITP10721 976 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 PKMP14618 531 aaKnown RBP12.32□□□□□ -0.44
SCAF1-202ENST00000595242 TFEBP19484 476 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 RPS3P23396 243 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCAF1-202ENST00000595242 ARL4DP49703 201 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 CLCNKAP51800 687 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 NAGLUP54802 743 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 ATP6V0D1P61421 351 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 KCNJ2P63252 427 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 ZNF630Q2M218 657 aaPredicted RBP12.32□□□□□ -0.44
SCAF1-202ENST00000595242 PLEKHS1Q5SXH7 462 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 METTL21CQ5VZV1 264 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 BNC2Q6ZN30 1099 aaPredicted RBP12.32□□□□□ -0.44
SCAF1-202ENST00000595242 ISCA2Q86U28 154 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 RAB43Q86YS6 212 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 DSELQ8IZU8 1212 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 CLEC1AQ8NC01 280 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 KCNJ9Q92806 393 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 RELTQ969Z4 430 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 EID2BQ96D98 161 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 RAB3IPQ96QF0 476 aaPredicted RBP12.32□□□□□ -0.44
SCAF1-202ENST00000595242 TRMOQ9BU70 441 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 DERL2Q9GZP9 239 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 P2RY12Q9H244 342 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 POT1Q9NUX5 634 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 TAS2R13Q9NYV9 303 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 CRYL1Q9Y2S2 319 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 PKP3Q9Y446 797 aa12.32□□□□□ -0.44
SCAF1-202ENST00000595242 NCOA6Q14686 2063 aaPredicted RBP12.31□□□□□ -0.44
SCAF1-202ENST00000595242 AGAP14A8MT82 685 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 HDAC3O15379 428 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 NADKO95544 446 aaPredicted RBP12.31□□□□□ -0.44
SCAF1-202ENST00000595242 ESR1P03372 595 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 CAPN1P07384 714 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 CHRNGP07510 517 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 PRSS56P0CW18 603 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 ZNF30P17039 623 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 CAPN3P20807 821 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 SSTR2P30874 369 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 OTX2P32243 289 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 RPL14P50914 215 aaKnown RBP12.31□□□□□ -0.44
SCAF1-202ENST00000595242 NAA20P61599 178 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 HSD11B2P80365 405 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 PDAP1Q13442 181 aaKnown RBP12.31□□□□□ -0.44
SCAF1-202ENST00000595242 GPR19Q15760 415 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 ARL13AQ5H913 290 aaPredicted RBP12.31□□□□□ -0.44
SCAF1-202ENST00000595242 CTSL3PQ5NE16 218 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 FBXW10Q5XX13 1052 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 CDH24Q86UP0 819 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 KMT5CQ86Y97 462 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 PIANPQ8IYJ0 282 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 D2HGDHQ8N465 521 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 NKAPQ8N5F7 415 aaKnown RBP12.31□□□□□ -0.44
SCAF1-202ENST00000595242 UTP4Q969X6 686 aaKnown RBP12.31□□□□□ -0.44
SCAF1-202ENST00000595242 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.31□□□□□ -0.444e-7■■□□□ 11.8
SCAF1-202ENST00000595242 KIAA1191Q96A73 305 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 ZNF501Q96CX3 271 aaPredicted RBP12.31□□□□□ -0.44
SCAF1-202ENST00000595242 CLIP3Q96DZ5 547 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 FER1L6-AS2Q96M78 137 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 TRAPPC9Q96Q05 1148 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 ATOH8Q96SQ7 321 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 MAP3K3Q99759 626 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 CCDC28BQ9BUN5 200 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 GPR63Q9BZJ6 419 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 ZFYVE1Q9HBF4 777 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 ATXN10Q9UBB4 475 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 TRIM33Q9UPN9 1127 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 CSAG2Q9Y5P2 127 aa12.31□□□□□ -0.44
SCAF1-202ENST00000595242 UBA6A0AVT1 1052 aaPredicted RBP12.3□□□□□ -0.44
SCAF1-202ENST00000595242 OR52A4PA6NMU1 304 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 PDZK1P1A8MUH7 402 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 FADS2P1A8MWK0 482 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 SLC22A2O15244 555 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 ZBTB14O43829 449 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 VPS26AO75436 327 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 SRP72O76094 671 aaKnown RBP12.3□□□□□ -0.44
SCAF1-202ENST00000595242 KRT16P08779 473 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 ZNF8P17098 575 aaPredicted RBP12.3□□□□□ -0.44
SCAF1-202ENST00000595242 IMPDH1P20839 514 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 RPL10P27635 214 aaKnown RBP12.3□□□□□ -0.44
SCAF1-202ENST00000595242 PRDX6P30041 224 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 DCAF10Q5QP82 559 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 PRAMEF17Q5VTA0 474 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 FAM198BQ6UWH4 519 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 FRMD7Q6ZUT3 714 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 SNX20Q7Z614 316 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 MRGPRGQ86SM5 289 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 PACS2Q86VP3 889 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 TREML1Q86YW5 311 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 RBM12BQ8IXT5 1001 aaKnown RBP12.3□□□□□ -0.44
SCAF1-202ENST00000595242 SPATA6LQ8N4H0 392 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 OR8K5Q8NH50 307 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 PTERQ96BW5 349 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 CXorf40BQ96DE9 158 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 MAELQ96JY0 434 aaKnown RBP12.3□□□□□ -0.44
SCAF1-202ENST00000595242 FAR2Q96K12 515 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 RILPQ96NA2 401 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms